Feature identity
- Identifier
- PaHa01g19970.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 510 bp
- Genomic location
- 1:35,965,144–35,965,879
- Strand
- +
Hass · mRNA
PaHa01g19970.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 510
- bp
- 1:35,965,144–35,965,879
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g19970
- eggNOG
- Preferred name: ACX1 | Seed ortholog: 56857.A0A200Q2H8 | COG: S | eggNOG OG: ACOX@131567|B-2, Acyl-CoA_dh_M@131567|B-2, Acyl-CoA_dh_M@2759|Bz-10, Acyl-CoA_ox_N@131567|A-1*, Acyl-CoA_ox_N@2759|C-2
- Gene Ontology
- GO:0001676 long-chain fatty acid metabolic process; GO:0003997 acyl-CoA oxidase activity; GO:0005737 cytoplasm; GO:0005777 peroxisome; GO:0005783 endoplasmic reticulum; GO:0005829 cytosol; GO:0006635 fatty acid beta-oxidation; GO:0009506 plasmodesma; GO:0009611 response to wounding; GO:0009620 response to fungus; GO:0009695 jasmonic acid biosynthetic process
- KEGG
- EC: ec:1.3.3.6 | KO: K00232 | Pathway: 00071, 00410, 00592, 00640, 01040, 01100, 01110, 01200, 01212, 04146 | Module: M00013, M00087, M00113, M00861 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g19970.1-protein
derives_frommRNAPaHa01g19970.1
mRNAPaHa01g19970.1
part_ofgenePaHa01g19970
CDS
part_ofPaHa01g19970.1-CDS-1-1787993825:35965144..35965309mRNAPaHa01g19970.1
CDS
part_ofPaHa01g19970.1-CDS-1-1787993825:35965536..35965879mRNAPaHa01g19970.1
exon
part_ofPaHa01g19970.1-exon-1-1787993825:35965144..35965309mRNAPaHa01g19970.1
exon
part_ofPaHa01g19970.1-exon-1-1787993825:35965536..35965879mRNAPaHa01g19970.1
