Feature identity
- Identifier
- Pa12g2180.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 954 bp
- Genomic location
- Pa12:45,507,513–45,515,634
- Strand
- −
West Indian T2T · mRNA
Pa12g2180.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 954
- bp
- Pa12:45,507,513–45,515,634
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa12g2180
- eggNOG
- Preferred name: SMB | Seed ortholog: 337451.A0A443PED4 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|om-16, NAM@3398|AbD-20, NAM@35493|AE-6, NAM@58023|AGC-18
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009834 plant-type secondary cell wall biogenesis; GO:0048829 root cap development
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa12g2180.1-protein
derives_frommRNAPa12g2180.1
mRNAPa12g2180.1
part_ofgenePa12g2180
exon
part_ofPa12g2180.1:1mRNAPa12g2180.1
exon
part_ofPa12g2180.1:2mRNAPa12g2180.1
exon
part_ofPa12g2180.1:3mRNAPa12g2180.1
CDS
part_ofPa12g2180.1:cdsmRNAPa12g2180.1
