West Indian T2T · mRNA

Pa12g2129.1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

672
bp
Pa12:44,743,382–44,753,869
genomic location
Record overview

Feature identity

Identifier
Pa12g2129.1
Feature type
mRNA
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
672 bp
Genomic location
Pa12:44,743,382–44,753,869
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: AG2 | Seed ortholog: 337451.A0A3S3NPP1 | COG: S | eggNOG OG: K-box@131221|b-5, K-box@131567|A-1*, K-box@2759|O-4, K-box@3398|Mi-13, SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3398|Aqc-25, SRF-TF@35493|jY-20
Gene Ontology
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009414 response to water deprivation; GO:0010047 fruit dehiscence; GO:0010097 specification of stamen identity; GO:0010582 floral meristem determinacy; GO:0046983 protein dimerization activity; GO:0048366 leaf development; GO:0048440 carpel development; GO:0048443 stamen development; GO:0048481 plant ovule development; GO:0048497 maintenance of floral organ identity; GO:0090376 seed trichome differentiation
KEGG
KO: K09264 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.