Pa12g2318.1

West Indian T2T · mRNA

Pa12g2318.1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

4,812
bp
Pa12:47,305,648–47,338,101
genomic location
Record overview

Feature identity

Identifier
Pa12g2318.1
Feature type
mRNA
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
4,812 bp
Genomic location
Pa12:47,305,648–47,338,101
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

Functional index matched identifier: Pa12g2318

eggNOG
Preferred name: RAD54 | Seed ortholog: 337451.A0A443PZ99 | eggNOG OG: Helicase_C|ADGYI0@2759, SNF2-rel_dom@131567|CT-8
Gene Ontology
GO:0003682 chromatin binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008198 ferrous iron binding; GO:0009555 pollen development; GO:0015616 DNA translocase activity; GO:0016887 ATP hydrolysis activity; GO:0032183 SUMO binding; GO:0042393 histone binding; GO:0043007 maintenance of rDNA; GO:0050341 thymine dioxygenase activity; GO:0061629 RNA polymerase II-specific DNA-binding transcription factor binding; GO:0062072 histone H3K9me2/3 reader activity; GO:0070087 chromo shadow domain binding; GO:0140658 ATP-dependent chromatin remodeler activity
KEGG
EC: ec:1.14.11.6 | KO: K10779 | Pathway: 03440, 04110 | BRITE: 00001, 03000, 03036
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.

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