Feature identity
- Identifier
- PaHa06g14780.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 714 bp
- Genomic location
- 6:25,999,471–26,026,961
- Strand
- +
Hass · mRNA
PaHa06g14780.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 714
- bp
- 6:25,999,471–26,026,961
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa06g14780
- eggNOG
- Preferred name: LOC104598348 | Seed ortholog: 337451.A0A3S3MYK2 | COG: S | eggNOG OG: zf-LSD1@131567|X-5, zf-LSD1@2759|Aj-10, zf-LSD1@3398|At-11
- Gene Ontology
- GO:0000303 response to superoxide; GO:0001666 response to hypoxia; GO:0002240 response to molecule of oomycetes origin; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005576 extracellular region; GO:0009626 plant-type hypersensitive response; GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway; GO:0010104 regulation of ethylene-activated signaling pathway; GO:0010310 regulation of hydrogen peroxide metabolic process; GO:0010618 aerenchyma formation; GO:0043069 negative regulation of programmed cell death
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa06g14780.1-protein
derives_frommRNAPaHa06g14780.1
mRNAPaHa06g14780.1
part_ofgenePaHa06g14780
CDS
part_ofPaHa06g14780.1-CDS-6-1787993825:25999471..25999627mRNAPaHa06g14780.1
CDS
part_ofPaHa06g14780.1-CDS-6-1787993825:26010948..26010992mRNAPaHa06g14780.1
CDS
part_ofPaHa06g14780.1-CDS-6-1787993825:26014224..26014337mRNAPaHa06g14780.1
CDS
part_ofPaHa06g14780.1-CDS-6-1787993825:26018472..26018582mRNAPaHa06g14780.1
CDS
part_ofPaHa06g14780.1-CDS-6-1787993825:26026321..26026418mRNAPaHa06g14780.1
CDS
part_ofPaHa06g14780.1-CDS-6-1787993825:26026521..26026601mRNAPaHa06g14780.1
CDS
part_ofPaHa06g14780.1-CDS-6-1787993825:26026740..26026805mRNAPaHa06g14780.1
CDS
part_ofPaHa06g14780.1-CDS-6-1787993825:26026920..26026961mRNAPaHa06g14780.1
exon
part_ofPaHa06g14780.1-exon-6-1787993825:25999471..25999627mRNAPaHa06g14780.1
exon
part_ofPaHa06g14780.1-exon-6-1787993825:26010948..26010992mRNAPaHa06g14780.1
exon
part_ofPaHa06g14780.1-exon-6-1787993825:26014224..26014337mRNAPaHa06g14780.1
exon
part_ofPaHa06g14780.1-exon-6-1787993825:26018472..26018582mRNAPaHa06g14780.1
exon
part_ofPaHa06g14780.1-exon-6-1787993825:26026321..26026418mRNAPaHa06g14780.1
exon
part_ofPaHa06g14780.1-exon-6-1787993825:26026521..26026601mRNAPaHa06g14780.1
exon
part_ofPaHa06g14780.1-exon-6-1787993825:26026740..26026805mRNAPaHa06g14780.1
exon
part_ofPaHa06g14780.1-exon-6-1787993825:26026920..26026961mRNAPaHa06g14780.1
