Feature identity
- Identifier
- PaHa06g14200.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 741 bp
- Genomic location
- 6:24,551,912–24,554,850
- Strand
- −
Hass · mRNA
PaHa06g14200.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 741
- bp
- 6:24,551,912–24,554,850
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa06g14200
- eggNOG
- Preferred name: HB4 | Seed ortholog: 180498.A0A067KRL6 | COG: S | eggNOG OG: Homeodomain@131567|HP-13, Homeodomain@35493|CNy-26, MEKHLA@131567|A-1, MEKHLA@35493|P-5, START@131567|e-5, START@2759|CL-9, START@3398|Mr-14, START@35493|JK-13
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009855 determination of bilateral symmetry; GO:0009880 embryonic pattern specification; GO:0009943 adaxial/abaxial axis specification; GO:0009944 polarity specification of adaxial/abaxial axis; GO:0009955 adaxial/abaxial pattern specification; GO:0010014 meristem initiation; GO:0010072 primary shoot apical meristem specification; GO:0080060 integument development
- KEGG
- KO: K09338 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa06g14200.1-protein
derives_frommRNAPaHa06g14200.1
mRNAPaHa06g14200.1
part_ofgenePaHa06g14200
CDS
part_ofPaHa06g14200.1-CDS-6-1787993825:24551912..24552058mRNAPaHa06g14200.1
CDS
part_ofPaHa06g14200.1-CDS-6-1787993825:24552505..24552654mRNAPaHa06g14200.1
CDS
part_ofPaHa06g14200.1-CDS-6-1787993825:24552991..24553102mRNAPaHa06g14200.1
CDS
part_ofPaHa06g14200.1-CDS-6-1787993825:24554519..24554850mRNAPaHa06g14200.1
exon
part_ofPaHa06g14200.1-exon-6-1787993825:24551912..24552058mRNAPaHa06g14200.1
exon
part_ofPaHa06g14200.1-exon-6-1787993825:24552505..24552654mRNAPaHa06g14200.1
exon
part_ofPaHa06g14200.1-exon-6-1787993825:24552991..24553102mRNAPaHa06g14200.1
exon
part_ofPaHa06g14200.1-exon-6-1787993825:24554519..24554850mRNAPaHa06g14200.1
