Feature identity
- Identifier
- PaHa06g13890.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,607 bp
- Genomic location
- 6:23,552,601–23,572,279
- Strand
- −
Hass · mRNA
PaHa06g13890.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,607
- bp
- 6:23,552,601–23,572,279
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa06g13890
- eggNOG
- Preferred name: ARF6 | Seed ortholog: 337451.A0A443PDD7 | COG: S | eggNOG OG: AUX_IAA@131567|A-1*, AUX_IAA@2759|AW-7, AUX_IAA@3193|xW-20, AUX_IAA@3398|Aeu-24, Auxin_resp@131221|y-7, Auxin_resp@131567|A-1*, Auxin_resp@2759|O-4, Auxin_resp@3193|Aa-8, Auxin_resp@3398|Dy-12, B3@131221|yd-19, B3@131567|A-1*, B3@3193|AqU-23, B3@33090|Id-12, B3@3398|BZk-26!
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009733 response to auxin; GO:0009908 flower development
- KEGG
- KO: K14486 | Pathway: 04075 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa06g13890.1-protein
derives_frommRNAPaHa06g13890.1
mRNAPaHa06g13890.1
part_ofgenePaHa06g13890
CDS
part_ofPaHa06g13890.1-CDS-6-1787993825:23552601..23552799mRNAPaHa06g13890.1
CDS
part_ofPaHa06g13890.1-CDS-6-1787993825:23562324..23562514mRNAPaHa06g13890.1
CDS
part_ofPaHa06g13890.1-CDS-6-1787993825:23564344..23564415mRNAPaHa06g13890.1
CDS
part_ofPaHa06g13890.1-CDS-6-1787993825:23564734..23565524mRNAPaHa06g13890.1
CDS
part_ofPaHa06g13890.1-CDS-6-1787993825:23565702..23565849mRNAPaHa06g13890.1
CDS
part_ofPaHa06g13890.1-CDS-6-1787993825:23566176..23566251mRNAPaHa06g13890.1
CDS
part_ofPaHa06g13890.1-CDS-6-1787993825:23566495..23566617mRNAPaHa06g13890.1
CDS
part_ofPaHa06g13890.1-CDS-6-1787993825:23567167..23567331mRNAPaHa06g13890.1
CDS
part_ofPaHa06g13890.1-CDS-6-1787993825:23567527..23567617mRNAPaHa06g13890.1
CDS
part_ofPaHa06g13890.1-CDS-6-1787993825:23568811..23568895mRNAPaHa06g13890.1
CDS
part_ofPaHa06g13890.1-CDS-6-1787993825:23569070..23569225mRNAPaHa06g13890.1
CDS
part_ofPaHa06g13890.1-CDS-6-1787993825:23569299..23569355mRNAPaHa06g13890.1
CDS
part_ofPaHa06g13890.1-CDS-6-1787993825:23569453..23569551mRNAPaHa06g13890.1
CDS
part_ofPaHa06g13890.1-CDS-6-1787993825:23571255..23571367mRNAPaHa06g13890.1
CDS
part_ofPaHa06g13890.1-CDS-6-1787993825:23571878..23572075mRNAPaHa06g13890.1
CDS
part_ofPaHa06g13890.1-CDS-6-1787993825:23572237..23572279mRNAPaHa06g13890.1
exon
part_ofPaHa06g13890.1-exon-6-1787993825:23552601..23552799mRNAPaHa06g13890.1
exon
part_ofPaHa06g13890.1-exon-6-1787993825:23562324..23562514mRNAPaHa06g13890.1
exon
part_ofPaHa06g13890.1-exon-6-1787993825:23564344..23564415mRNAPaHa06g13890.1
exon
part_ofPaHa06g13890.1-exon-6-1787993825:23564734..23565524mRNAPaHa06g13890.1
exon
part_ofPaHa06g13890.1-exon-6-1787993825:23565702..23565849mRNAPaHa06g13890.1
exon
part_ofPaHa06g13890.1-exon-6-1787993825:23566176..23566251mRNAPaHa06g13890.1
exon
part_ofPaHa06g13890.1-exon-6-1787993825:23566495..23566617mRNAPaHa06g13890.1
exon
part_ofPaHa06g13890.1-exon-6-1787993825:23567167..23567331mRNAPaHa06g13890.1
exon
part_ofPaHa06g13890.1-exon-6-1787993825:23567527..23567617mRNAPaHa06g13890.1
exon
part_ofPaHa06g13890.1-exon-6-1787993825:23568811..23568895mRNAPaHa06g13890.1
exon
part_ofPaHa06g13890.1-exon-6-1787993825:23569070..23569225mRNAPaHa06g13890.1
exon
part_ofPaHa06g13890.1-exon-6-1787993825:23569299..23569355mRNAPaHa06g13890.1
exon
part_ofPaHa06g13890.1-exon-6-1787993825:23569453..23569551mRNAPaHa06g13890.1
exon
part_ofPaHa06g13890.1-exon-6-1787993825:23571255..23571367mRNAPaHa06g13890.1
exon
part_ofPaHa06g13890.1-exon-6-1787993825:23571878..23572075mRNAPaHa06g13890.1
exon
part_ofPaHa06g13890.1-exon-6-1787993825:23572237..23572279mRNAPaHa06g13890.1
