Feature identity
- Identifier
- PaHa06g12470.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 591 bp
- Genomic location
- 6:20,444,869–20,445,790
- Strand
- +
Hass · mRNA
PaHa06g12470.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 591
- bp
- 6:20,444,869–20,445,790
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa06g12470
- eggNOG
- Preferred name: IAA4 | Seed ortholog: 337451.A0A443PDN5 | COG: S | eggNOG OG: AUX_IAA@131567|A-1*, AUX_IAA@2759|CX-9, AUX_IAA@3398|Xn-16
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009733 response to auxin; GO:0042802 identical protein binding
- KEGG
- KO: K14484 | Pathway: 04075 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa06g12470.1-protein
derives_frommRNAPaHa06g12470.1
mRNAPaHa06g12470.1
part_ofgenePaHa06g12470
CDS
part_ofPaHa06g12470.1-CDS-6-1787993825:20444869..20445077mRNAPaHa06g12470.1
CDS
part_ofPaHa06g12470.1-CDS-6-1787993825:20445189..20445394mRNAPaHa06g12470.1
CDS
part_ofPaHa06g12470.1-CDS-6-1787993825:20445493..20445592mRNAPaHa06g12470.1
CDS
part_ofPaHa06g12470.1-CDS-6-1787993825:20445715..20445790mRNAPaHa06g12470.1
exon
part_ofPaHa06g12470.1-exon-6-1787993825:20444869..20445077mRNAPaHa06g12470.1
exon
part_ofPaHa06g12470.1-exon-6-1787993825:20445189..20445394mRNAPaHa06g12470.1
exon
part_ofPaHa06g12470.1-exon-6-1787993825:20445493..20445592mRNAPaHa06g12470.1
exon
part_ofPaHa06g12470.1-exon-6-1787993825:20445715..20445790mRNAPaHa06g12470.1
