Feature identity
- Identifier
- PaHa06g11850.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,575 bp
- Genomic location
- 6:19,283,253–19,284,827
- Strand
- −
Hass · mRNA
PaHa06g11850.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,575
- bp
- 6:19,283,253–19,284,827
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa06g11850
- eggNOG
- Preferred name: KCS1 | Seed ortholog: 29760.F6I2X3 | COG: S | eggNOG OG: ACP_syn_III_C@2759|B-2!, ACP_syn_III_C@35493|CJ-11, FAE1_CUT1_RppA@131567|A-1, FAE1_CUT1_RppA@2759|BO-11, FAE1_CUT1_RppA@33090|HN-17
- Gene Ontology
- GO:0000038 very long-chain fatty acid metabolic process; GO:0005515 protein binding; GO:0005737 cytoplasm; GO:0005783 endoplasmic reticulum; GO:0005789 endoplasmic reticulum membrane; GO:0009409 response to cold; GO:0009416 response to light stimulus; GO:0009922 fatty acid elongase activity; GO:0010025 wax biosynthetic process; GO:0016020 membrane; GO:0022626 cytosolic ribosome; GO:0030497 fatty acid elongation; GO:0042761 very long-chain fatty acid biosynthetic process; GO:0070417 cellular response to cold; GO:0160062 cutin-based cuticle development
- KEGG
- EC: ec:2.3.1.199 | KO: K15397 | Pathway: 00062, 01100, 01110, 04626 | Module: M00415 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa06g11850.1-protein
derives_frommRNAPaHa06g11850.1
mRNAPaHa06g11850.1
part_ofgenePaHa06g11850
CDS
part_ofPaHa06g11850.1-CDS-6-1787993825:19283253..19284827mRNAPaHa06g11850.1
exon
part_ofPaHa06g11850.1-exon-6-1787993825:19283253..19284827mRNAPaHa06g11850.1
