Feature identity
- Identifier
- PaHa06g11530.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,430 bp
- Genomic location
- 6:18,162,474–18,172,337
- Strand
- −
Hass · mRNA
PaHa06g11530.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,430
- bp
- 6:18,162,474–18,172,337
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa06g11530
- eggNOG
- Preferred name: TCX2 | Seed ortholog: 337451.A0A443PDT6 | COG: S | eggNOG OG: TCR@131221|Lu-19, TCR@131567|A-1*, TCR@1437183|oD-30, TCR@2759|AQ-7!, TCR@3193|OY-20, TCR@58023|hx-27
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009934 regulation of meristem structural organization; GO:0010235 guard mother cell cytokinesis; GO:0010375 stomatal complex patterning; GO:0010440 stomatal lineage progression; GO:0010481 epidermal cell division; GO:0048444 floral organ morphogenesis; GO:0051302 regulation of cell division
- KEGG
- KO: K21776 | Pathway: 04218, 04814 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa06g11530.1-protein
derives_frommRNAPaHa06g11530.1
mRNAPaHa06g11530.1
part_ofgenePaHa06g11530
CDS
part_ofPaHa06g11530.1-CDS-6-1787993825:18162474..18162846mRNAPaHa06g11530.1
CDS
part_ofPaHa06g11530.1-CDS-6-1787993825:18162937..18163099mRNAPaHa06g11530.1
CDS
part_ofPaHa06g11530.1-CDS-6-1787993825:18163764..18163830mRNAPaHa06g11530.1
CDS
part_ofPaHa06g11530.1-CDS-6-1787993825:18163906..18164001mRNAPaHa06g11530.1
CDS
part_ofPaHa06g11530.1-CDS-6-1787993825:18164080..18164260mRNAPaHa06g11530.1
CDS
part_ofPaHa06g11530.1-CDS-6-1787993825:18166490..18166564mRNAPaHa06g11530.1
CDS
part_ofPaHa06g11530.1-CDS-6-1787993825:18166684..18167171mRNAPaHa06g11530.1
CDS
part_ofPaHa06g11530.1-CDS-6-1787993825:18170034..18170808mRNAPaHa06g11530.1
CDS
part_ofPaHa06g11530.1-CDS-6-1787993825:18170909..18171069mRNAPaHa06g11530.1
CDS
part_ofPaHa06g11530.1-CDS-6-1787993825:18172287..18172337mRNAPaHa06g11530.1
exon
part_ofPaHa06g11530.1-exon-6-1787993825:18162474..18162846mRNAPaHa06g11530.1
exon
part_ofPaHa06g11530.1-exon-6-1787993825:18162937..18163099mRNAPaHa06g11530.1
exon
part_ofPaHa06g11530.1-exon-6-1787993825:18163764..18163830mRNAPaHa06g11530.1
exon
part_ofPaHa06g11530.1-exon-6-1787993825:18163906..18164001mRNAPaHa06g11530.1
exon
part_ofPaHa06g11530.1-exon-6-1787993825:18164080..18164260mRNAPaHa06g11530.1
exon
part_ofPaHa06g11530.1-exon-6-1787993825:18166490..18166564mRNAPaHa06g11530.1
exon
part_ofPaHa06g11530.1-exon-6-1787993825:18166684..18167171mRNAPaHa06g11530.1
exon
part_ofPaHa06g11530.1-exon-6-1787993825:18170034..18170808mRNAPaHa06g11530.1
exon
part_ofPaHa06g11530.1-exon-6-1787993825:18170909..18171069mRNAPaHa06g11530.1
exon
part_ofPaHa06g11530.1-exon-6-1787993825:18172287..18172337mRNAPaHa06g11530.1
