Feature identity
- Identifier
- PaHa06g10660.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 975 bp
- Genomic location
- 6:16,586,416–16,590,105
- Strand
- +
Hass · mRNA
PaHa06g10660.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 975
- bp
- 6:16,586,416–16,590,105
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa06g10660
- eggNOG
- Preferred name: LOC110788135 | Seed ortholog: 337451.A0A443PE39 | COG: S | eggNOG OG: AUX_IAA@131567|A-1*, AUX_IAA@2759|BU-8, AUX_IAA@33090|Fw-11, AUX_IAA@3398|de-17
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009733 response to auxin; GO:0009880 embryonic pattern specification; GO:0010051 xylem and phloem pattern formation; GO:0042802 identical protein binding; GO:0045892 negative regulation of DNA-templated transcription; GO:0048364 root development
- KEGG
- KO: K14484 | Pathway: 04075 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa06g10660.1-protein
derives_frommRNAPaHa06g10660.1
mRNAPaHa06g10660.1
part_ofgenePaHa06g10660
CDS
part_ofPaHa06g10660.1-CDS-6-1787993825:16586416..16586810mRNAPaHa06g10660.1
CDS
part_ofPaHa06g10660.1-CDS-6-1787993825:16587465..16587790mRNAPaHa06g10660.1
CDS
part_ofPaHa06g10660.1-CDS-6-1787993825:16588701..16588839mRNAPaHa06g10660.1
CDS
part_ofPaHa06g10660.1-CDS-6-1787993825:16589776..16589837mRNAPaHa06g10660.1
CDS
part_ofPaHa06g10660.1-CDS-6-1787993825:16590053..16590105mRNAPaHa06g10660.1
exon
part_ofPaHa06g10660.1-exon-6-1787993825:16586416..16586810mRNAPaHa06g10660.1
exon
part_ofPaHa06g10660.1-exon-6-1787993825:16587465..16587790mRNAPaHa06g10660.1
exon
part_ofPaHa06g10660.1-exon-6-1787993825:16588701..16588839mRNAPaHa06g10660.1
exon
part_ofPaHa06g10660.1-exon-6-1787993825:16589776..16589837mRNAPaHa06g10660.1
exon
part_ofPaHa06g10660.1-exon-6-1787993825:16590053..16590105mRNAPaHa06g10660.1
