West Indian T2T · gene

Pa11g0195

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

14,371
bp
Pa11:4,039,382–4,053,752
genomic location
Record overview

Feature identity

Identifier
Pa11g0195
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
14,371 bp
Genomic location
Pa11:4,039,382–4,053,752
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: CDC5 | Seed ortholog: 337451.A0A443PLN8 | COG: COG5850 | eggNOG OG: Myb_Cef@2759|A-1, Myb_DNA-binding@131567|ji-21, Myb_DNA-binding@2759|ACr-25
Gene Ontology
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005576 extracellular region; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0042742 defense response to bacterium; GO:0050832 defense response to fungus
KEGG
KO: K12860 | Pathway: 03040 | BRITE: 00001, 03041, 03400
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.