Feature identity
- Identifier
- PaHa06g10260.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,797 bp
- Genomic location
- 6:15,118,756–15,121,148
- Strand
- −
Hass · mRNA
PaHa06g10260.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,797
- bp
- 6:15,118,756–15,121,148
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa06g10260
- eggNOG
- Preferred name: LOC104588301 | Seed ortholog: 337451.A0A443PE41 | COG: S | eggNOG OG: WRKY@131567|A-1*, WRKY@2759|Ea-12, WRKY@3193|Uq-17, WRKY@3398|Ats-27, WRKY@35493|In-14
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0016036 cellular response to phosphate starvation; GO:0045892 negative regulation of DNA-templated transcription; GO:0080169 cellular response to boron-containing substance deprivation; GO:1900057 positive regulation of leaf senescence
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa06g10260.1-protein
derives_frommRNAPaHa06g10260.1
mRNAPaHa06g10260.1
part_ofgenePaHa06g10260
CDS
part_ofPaHa06g10260.1-CDS-6-1787993825:15118756..15119394mRNAPaHa06g10260.1
CDS
part_ofPaHa06g10260.1-CDS-6-1787993825:15119511..15119624mRNAPaHa06g10260.1
CDS
part_ofPaHa06g10260.1-CDS-6-1787993825:15119740..15120186mRNAPaHa06g10260.1
CDS
part_ofPaHa06g10260.1-CDS-6-1787993825:15120283..15120444mRNAPaHa06g10260.1
CDS
part_ofPaHa06g10260.1-CDS-6-1787993825:15120586..15120684mRNAPaHa06g10260.1
CDS
part_ofPaHa06g10260.1-CDS-6-1787993825:15120813..15121148mRNAPaHa06g10260.1
exon
part_ofPaHa06g10260.1-exon-6-1787993825:15118756..15119394mRNAPaHa06g10260.1
exon
part_ofPaHa06g10260.1-exon-6-1787993825:15119511..15119624mRNAPaHa06g10260.1
exon
part_ofPaHa06g10260.1-exon-6-1787993825:15119740..15120186mRNAPaHa06g10260.1
exon
part_ofPaHa06g10260.1-exon-6-1787993825:15120283..15120444mRNAPaHa06g10260.1
exon
part_ofPaHa06g10260.1-exon-6-1787993825:15120586..15120684mRNAPaHa06g10260.1
exon
part_ofPaHa06g10260.1-exon-6-1787993825:15120813..15121148mRNAPaHa06g10260.1
