Feature identity
- Identifier
- Pa10g1784
- Feature type
- gene
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 7,040 bp
- Genomic location
- Pa10:43,041,791–43,048,830
- Strand
- −
West Indian T2T · gene
Pa10g1784
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 7,040
- bp
- Pa10:43,041,791–43,048,830
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: HSBP, LOC104606142 | Seed ortholog: 180675.A0A4D8ZY66, 3635.A0A1U8L5U4 | COG: S | eggNOG OG: HSBP1@131567|A-1, HSBP1@3398|Cx-11, HSBP1@3398|Cy-11, HSBP1@3629|NP-17
- Gene Ontology
- GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0003674 molecular_function; GO:0003714 transcription corepressor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0005794 Golgi apparatus; GO:0005813 centrosome; GO:0005829 cytosol; GO:0006936 muscle contraction; GO:0007417 central nervous system development; GO:0009408 response to heat; GO:0010468 regulation of gene expression; GO:0010520 regulation of reciprocal meiotic recombination; GO:0014029 neural crest formation; GO:0016607 nuclear speck; GO:0019896 axonal transport of mitochondrion; GO:0031072 heat shock protein binding; GO:0035987 endodermal cell differentiation; GO:0042802 identical protein binding; GO:0048316 seed development; GO:0065003 protein-containing complex assembly; GO:0070370 cellular heat acclimation; GO:0071203 WASH complex; GO:0140297 DNA-binding transcription factor binding
- KEGG
- KO: K19765 | Pathway: 04212 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPa10g1784.1
part_ofgenePa10g1784
mRNAPa10g1784.2
part_ofgenePa10g1784
