Feature identity
- Identifier
- PaHa06g08690.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 780 bp
- Genomic location
- 6:12,778,939–12,816,931
- Strand
- +
Hass · mRNA
PaHa06g08690.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 780
- bp
- 6:12,778,939–12,816,931
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa06g08690
- eggNOG
- Preferred name: AG2 | Seed ortholog: 337451.A0A443PEH7 | COG: S | eggNOG OG: K-box@131221|b-5, K-box@131567|A-1*, K-box@2759|O-4, K-box@3398|Mi-13, SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3398|Aqc-25, SRF-TF@35493|jY-20
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009414 response to water deprivation; GO:0010047 fruit dehiscence; GO:0010097 specification of stamen identity; GO:0010582 floral meristem determinacy; GO:0046983 protein dimerization activity; GO:0048366 leaf development; GO:0048440 carpel development; GO:0048443 stamen development; GO:0048481 plant ovule development; GO:0048497 maintenance of floral organ identity; GO:0090376 seed trichome differentiation
- KEGG
- KO: K09264 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa06g08690.1-protein
derives_frommRNAPaHa06g08690.1
mRNAPaHa06g08690.1
part_ofgenePaHa06g08690
CDS
part_ofPaHa06g08690.1-CDS-6-1787993825:12778939..12778943mRNAPaHa06g08690.1
CDS
part_ofPaHa06g08690.1-CDS-6-1787993825:12779750..12779831mRNAPaHa06g08690.1
CDS
part_ofPaHa06g08690.1-CDS-6-1787993825:12779932..12780134mRNAPaHa06g08690.1
CDS
part_ofPaHa06g08690.1-CDS-6-1787993825:12806280..12806361mRNAPaHa06g08690.1
CDS
part_ofPaHa06g08690.1-CDS-6-1787993825:12812728..12812789mRNAPaHa06g08690.1
CDS
part_ofPaHa06g08690.1-CDS-6-1787993825:12812861..12812960mRNAPaHa06g08690.1
CDS
part_ofPaHa06g08690.1-CDS-6-1787993825:12813086..12813127mRNAPaHa06g08690.1
CDS
part_ofPaHa06g08690.1-CDS-6-1787993825:12813349..12813390mRNAPaHa06g08690.1
CDS
part_ofPaHa06g08690.1-CDS-6-1787993825:12813496..12813653mRNAPaHa06g08690.1
CDS
part_ofPaHa06g08690.1-CDS-6-1787993825:12816928..12816931mRNAPaHa06g08690.1
exon
part_ofPaHa06g08690.1-exon-6-1787993825:12778939..12778943mRNAPaHa06g08690.1
exon
part_ofPaHa06g08690.1-exon-6-1787993825:12779750..12779831mRNAPaHa06g08690.1
exon
part_ofPaHa06g08690.1-exon-6-1787993825:12779932..12780134mRNAPaHa06g08690.1
exon
part_ofPaHa06g08690.1-exon-6-1787993825:12806280..12806361mRNAPaHa06g08690.1
exon
part_ofPaHa06g08690.1-exon-6-1787993825:12812728..12812789mRNAPaHa06g08690.1
exon
part_ofPaHa06g08690.1-exon-6-1787993825:12812861..12812960mRNAPaHa06g08690.1
exon
part_ofPaHa06g08690.1-exon-6-1787993825:12813086..12813127mRNAPaHa06g08690.1
exon
part_ofPaHa06g08690.1-exon-6-1787993825:12813349..12813390mRNAPaHa06g08690.1
exon
part_ofPaHa06g08690.1-exon-6-1787993825:12813496..12813653mRNAPaHa06g08690.1
exon
part_ofPaHa06g08690.1-exon-6-1787993825:12816928..12816931mRNAPaHa06g08690.1
