Feature identity
- Identifier
- PaHa06g08640.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 915 bp
- Genomic location
- 6:12,622,076–12,626,813
- Strand
- −
Hass · mRNA
PaHa06g08640.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 915
- bp
- 6:12,622,076–12,626,813
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa06g08640
- eggNOG
- Preferred name: LOC104608418 | Seed ortholog: 337451.A0A443PEK1 | COG: S | eggNOG OG: zf-B_box@2759|B-2!, zf-B_box@33090|l-7, zf-B_box@3398|RD-17, zf-B_box@35493|CE-11
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009641 shade avoidance; GO:0009658 chloroplast organization; GO:0009718 anthocyanin-containing compound biosynthetic process; GO:0015995 chlorophyll biosynthetic process; GO:0016607 nuclear speck
- KEGG
- KO: K12135 | Pathway: 04712 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa06g08640.1-protein
derives_frommRNAPaHa06g08640.1
mRNAPaHa06g08640.1
part_ofgenePaHa06g08640
CDS
part_ofPaHa06g08640.1-CDS-6-1787993825:12622076..12622393mRNAPaHa06g08640.1
CDS
part_ofPaHa06g08640.1-CDS-6-1787993825:12623852..12624268mRNAPaHa06g08640.1
CDS
part_ofPaHa06g08640.1-CDS-6-1787993825:12626634..12626813mRNAPaHa06g08640.1
exon
part_ofPaHa06g08640.1-exon-6-1787993825:12622076..12622393mRNAPaHa06g08640.1
exon
part_ofPaHa06g08640.1-exon-6-1787993825:12623852..12624268mRNAPaHa06g08640.1
exon
part_ofPaHa06g08640.1-exon-6-1787993825:12626634..12626813mRNAPaHa06g08640.1
