Feature identity
- Identifier
- PaHa06g06110.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 720 bp
- Genomic location
- 6:9,288,171–9,288,890
- Strand
- +
Hass · mRNA
PaHa06g06110.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 720
- bp
- 6:9,288,171–9,288,890
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa06g06110
- eggNOG
- Preferred name: DREB1A | Seed ortholog: 337451.A0A3S3NKA9 | COG: S | eggNOG OG: AP2@131567|DU-11, AP2@33090|KR-15, AP2@3398|AmE-24, AP2@58023|ld-20
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009408 response to heat; GO:0009409 response to cold; GO:0009414 response to water deprivation; GO:0009631 cold acclimation; GO:0010371 regulation of gibberellin biosynthetic process; GO:0010628 positive regulation of gene expression; GO:0019760 glucosinolate metabolic process; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription; GO:0048510 regulation of timing of transition from vegetative to reproductive phase; GO:0050826 response to freezing; GO:0051510 regulation of unidimensional cell growth
- KEGG
- KO: K09286 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa06g06110.1-protein
derives_frommRNAPaHa06g06110.1
mRNAPaHa06g06110.1
part_ofgenePaHa06g06110
CDS
part_ofPaHa06g06110.1-CDS-6-1787993825:9288171..9288890mRNAPaHa06g06110.1
exon
part_ofPaHa06g06110.1-exon-6-1787993825:9288171..9288890mRNAPaHa06g06110.1
