Feature identity
- Identifier
- PaHa06g05090.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 738 bp
- Genomic location
- 6:7,265,305–7,266,990
- Strand
- −
Hass · mRNA
PaHa06g05090.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 738
- bp
- 6:7,265,305–7,266,990
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa06g05090
- eggNOG
- Preferred name: LHW | Seed ortholog: 337451.A0A443PF44 | COG: S | eggNOG OG: bHLH-MYC_N@131567|A-1*, bHLH-MYC_N@2759|B-2, bHLH-MYC_N@3193|m-7, bHLH-MYC_N@3398|AU-9
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0007140 male meiotic nuclear division; GO:0009507 chloroplast; GO:0010089 xylem development; GO:0048316 seed development; GO:0048364 root development; GO:0051321 meiotic cell cycle; GO:0071365 cellular response to auxin stimulus; GO:0090058 metaxylem development
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa06g05090.1-protein
derives_frommRNAPaHa06g05090.1
mRNAPaHa06g05090.1
part_ofgenePaHa06g05090
CDS
part_ofPaHa06g05090.1-CDS-6-1787993825:7265305..7265484mRNAPaHa06g05090.1
CDS
part_ofPaHa06g05090.1-CDS-6-1787993825:7265572..7265697mRNAPaHa06g05090.1
CDS
part_ofPaHa06g05090.1-CDS-6-1787993825:7265827..7265886mRNAPaHa06g05090.1
CDS
part_ofPaHa06g05090.1-CDS-6-1787993825:7266537..7266638mRNAPaHa06g05090.1
CDS
part_ofPaHa06g05090.1-CDS-6-1787993825:7266721..7266990mRNAPaHa06g05090.1
exon
part_ofPaHa06g05090.1-exon-6-1787993825:7265305..7265484mRNAPaHa06g05090.1
exon
part_ofPaHa06g05090.1-exon-6-1787993825:7265572..7265697mRNAPaHa06g05090.1
exon
part_ofPaHa06g05090.1-exon-6-1787993825:7265827..7265886mRNAPaHa06g05090.1
exon
part_ofPaHa06g05090.1-exon-6-1787993825:7266537..7266638mRNAPaHa06g05090.1
exon
part_ofPaHa06g05090.1-exon-6-1787993825:7266721..7266990mRNAPaHa06g05090.1
