Feature identity
- Identifier
- PaHa01g18810.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,578 bp
- Genomic location
- 1:31,738,488–31,749,137
- Strand
- +
Hass · mRNA
PaHa01g18810.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,578
- bp
- 1:31,738,488–31,749,137
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g18810
- eggNOG
- Preferred name: LOC104590318 | Seed ortholog: 337451.A0A3S3MHC7 | COG: S | eggNOG OG: VDE@131567|A-1*, VDE@2759|C-2
- Gene Ontology
- GO:0005515 protein binding; GO:0005576 extracellular region; GO:0005829 cytosol; GO:0006631 fatty acid metabolic process; GO:0009408 response to heat; GO:0009507 chloroplast; GO:0009534 chloroplast thylakoid; GO:0009543 chloroplast thylakoid lumen; GO:0010028 xanthophyll cycle; GO:0015994 chlorophyll metabolic process; GO:0016122 xanthophyll metabolic process; GO:0019904 protein domain specific binding; GO:0030095 chloroplast photosystem II; GO:0031977 thylakoid lumen; GO:0046422 violaxanthin de-epoxidase activity
- KEGG
- EC: ec:1.23.5.1 | KO: K09839 | Pathway: 00906, 01100, 01110 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g18810.1-protein
derives_frommRNAPaHa01g18810.1
mRNAPaHa01g18810.1
part_ofgenePaHa01g18810
CDS
part_ofPaHa01g18810.1-CDS-1-1787993825:31738488..31738494mRNAPaHa01g18810.1
CDS
part_ofPaHa01g18810.1-CDS-1-1787993825:31739020..31739121mRNAPaHa01g18810.1
CDS
part_ofPaHa01g18810.1-CDS-1-1787993825:31744723..31745039mRNAPaHa01g18810.1
CDS
part_ofPaHa01g18810.1-CDS-1-1787993825:31745149..31745318mRNAPaHa01g18810.1
CDS
part_ofPaHa01g18810.1-CDS-1-1787993825:31747028..31747124mRNAPaHa01g18810.1
CDS
part_ofPaHa01g18810.1-CDS-1-1787993825:31747623..31748014mRNAPaHa01g18810.1
CDS
part_ofPaHa01g18810.1-CDS-1-1787993825:31748645..31749137mRNAPaHa01g18810.1
exon
part_ofPaHa01g18810.1-exon-1-1787993825:31738488..31738494mRNAPaHa01g18810.1
exon
part_ofPaHa01g18810.1-exon-1-1787993825:31739020..31739121mRNAPaHa01g18810.1
exon
part_ofPaHa01g18810.1-exon-1-1787993825:31744723..31745039mRNAPaHa01g18810.1
exon
part_ofPaHa01g18810.1-exon-1-1787993825:31745149..31745318mRNAPaHa01g18810.1
exon
part_ofPaHa01g18810.1-exon-1-1787993825:31747028..31747124mRNAPaHa01g18810.1
exon
part_ofPaHa01g18810.1-exon-1-1787993825:31747623..31748014mRNAPaHa01g18810.1
exon
part_ofPaHa01g18810.1-exon-1-1787993825:31748645..31749137mRNAPaHa01g18810.1
