Feature identity
- Identifier
- PaHa06g04160.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,310 bp
- Genomic location
- 6:5,874,489–5,884,105
- Strand
- −
Hass · mRNA
PaHa06g04160.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,310
- bp
- 6:5,874,489–5,884,105
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa06g04160
- eggNOG
- Preferred name: LOC103708474 | Seed ortholog: 337451.A0A3S3N709 | eggNOG OG: Myb_DNA-bind_4@131567|B-2, Myb_DNA-bind_4@3193|FG-12
- Gene Ontology
- GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006351 DNA-templated transcription; GO:0008361 regulation of cell size; GO:0009414 response to water deprivation; GO:0010090 trichome morphogenesis; GO:0030308 negative regulation of cell growth; GO:0032876 negative regulation of DNA endoreduplication; GO:0042631 cellular response to water deprivation; GO:0043565 sequence-specific DNA binding; GO:0045892 negative regulation of DNA-templated transcription; GO:2000037 regulation of stomatal complex patterning; GO:2000038 regulation of stomatal complex development
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa06g04160.1-protein
derives_frommRNAPaHa06g04160.1
mRNAPaHa06g04160.1
part_ofgenePaHa06g04160
CDS
part_ofPaHa06g04160.1-CDS-6-1787993825:5874489..5874694mRNAPaHa06g04160.1
CDS
part_ofPaHa06g04160.1-CDS-6-1787993825:5881259..5881442mRNAPaHa06g04160.1
CDS
part_ofPaHa06g04160.1-CDS-6-1787993825:5881531..5883079mRNAPaHa06g04160.1
CDS
part_ofPaHa06g04160.1-CDS-6-1787993825:5883735..5884105mRNAPaHa06g04160.1
exon
part_ofPaHa06g04160.1-exon-6-1787993825:5874489..5874694mRNAPaHa06g04160.1
exon
part_ofPaHa06g04160.1-exon-6-1787993825:5881259..5881442mRNAPaHa06g04160.1
exon
part_ofPaHa06g04160.1-exon-6-1787993825:5881531..5883079mRNAPaHa06g04160.1
exon
part_ofPaHa06g04160.1-exon-6-1787993825:5883735..5884105mRNAPaHa06g04160.1
