Feature identity
- Identifier
- PaHa06g03640.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,185 bp
- Genomic location
- 6:5,326,652–5,328,688
- Strand
- +
Hass · mRNA
PaHa06g03640.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,185
- bp
- 6:5,326,652–5,328,688
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa06g03640
- eggNOG
- Preferred name: BHLH70 | Seed ortholog: 337451.A0A3S3N735 | COG: S | eggNOG OG: HLH@131567|OW-12, HLH@3193|AAN-17, HLH@3398|Abi-19, HLH@35493|gX-15
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0009631 cold acclimation; GO:0042803 protein homodimerization activity
- KEGG
- KO: K09092, K22495 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa06g03640.1-protein
derives_frommRNAPaHa06g03640.1
mRNAPaHa06g03640.1
part_ofgenePaHa06g03640
CDS
part_ofPaHa06g03640.1-CDS-6-1787993825:5326652..5326684mRNAPaHa06g03640.1
CDS
part_ofPaHa06g03640.1-CDS-6-1787993825:5327117..5327755mRNAPaHa06g03640.1
CDS
part_ofPaHa06g03640.1-CDS-6-1787993825:5327984..5328412mRNAPaHa06g03640.1
CDS
part_ofPaHa06g03640.1-CDS-6-1787993825:5328605..5328688mRNAPaHa06g03640.1
exon
part_ofPaHa06g03640.1-exon-6-1787993825:5326652..5326684mRNAPaHa06g03640.1
exon
part_ofPaHa06g03640.1-exon-6-1787993825:5327117..5327755mRNAPaHa06g03640.1
exon
part_ofPaHa06g03640.1-exon-6-1787993825:5327984..5328412mRNAPaHa06g03640.1
exon
part_ofPaHa06g03640.1-exon-6-1787993825:5328605..5328688mRNAPaHa06g03640.1
