Feature identity
- Identifier
- PaHa06g03590.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 3,954 bp
- Genomic location
- 6:5,207,268–5,227,461
- Strand
- −
Hass · mRNA
PaHa06g03590.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 3,954
- bp
- 6:5,207,268–5,227,461
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa06g03590
- eggNOG
- Preferred name: MED15A | Seed ortholog: 337451.A0A3S3QRX7 | eggNOG OG: KIX_2@131567|C-2, KIX_2@3193|Eg-11, KIX_2@58023|GS-12
- Gene Ontology
- GO:0003713 transcription coactivator activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0009751 response to salicylic acid; GO:0016592 mediator complex; GO:0031490 chromatin DNA binding; GO:0045723 positive regulation of fatty acid biosynthetic process
- KEGG
- EC: ec:2.3.1.48, ec:2.7.11.22 | KO: K14972 | Pathway: 03083, 03250 | BRITE: 00001, 03036
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa06g03590.1-protein
derives_frommRNAPaHa06g03590.1
mRNAPaHa06g03590.1
part_ofgenePaHa06g03590
CDS
part_ofPaHa06g03590.1-CDS-6-1787993825:5207268..5207298mRNAPaHa06g03590.1
CDS
part_ofPaHa06g03590.1-CDS-6-1787993825:5207402..5207572mRNAPaHa06g03590.1
CDS
part_ofPaHa06g03590.1-CDS-6-1787993825:5209159..5209247mRNAPaHa06g03590.1
CDS
part_ofPaHa06g03590.1-CDS-6-1787993825:5209328..5209519mRNAPaHa06g03590.1
CDS
part_ofPaHa06g03590.1-CDS-6-1787993825:5210580..5210918mRNAPaHa06g03590.1
CDS
part_ofPaHa06g03590.1-CDS-6-1787993825:5212968..5214392mRNAPaHa06g03590.1
CDS
part_ofPaHa06g03590.1-CDS-6-1787993825:5215258..5215332mRNAPaHa06g03590.1
CDS
part_ofPaHa06g03590.1-CDS-6-1787993825:5218275..5218345mRNAPaHa06g03590.1
CDS
part_ofPaHa06g03590.1-CDS-6-1787993825:5222258..5223532mRNAPaHa06g03590.1
CDS
part_ofPaHa06g03590.1-CDS-6-1787993825:5224189..5224306mRNAPaHa06g03590.1
CDS
part_ofPaHa06g03590.1-CDS-6-1787993825:5225898..5225997mRNAPaHa06g03590.1
CDS
part_ofPaHa06g03590.1-CDS-6-1787993825:5227394..5227461mRNAPaHa06g03590.1
exon
part_ofPaHa06g03590.1-exon-6-1787993825:5207268..5207298mRNAPaHa06g03590.1
exon
part_ofPaHa06g03590.1-exon-6-1787993825:5207402..5207572mRNAPaHa06g03590.1
exon
part_ofPaHa06g03590.1-exon-6-1787993825:5209159..5209247mRNAPaHa06g03590.1
exon
part_ofPaHa06g03590.1-exon-6-1787993825:5209328..5209519mRNAPaHa06g03590.1
exon
part_ofPaHa06g03590.1-exon-6-1787993825:5210580..5210918mRNAPaHa06g03590.1
exon
part_ofPaHa06g03590.1-exon-6-1787993825:5212968..5214392mRNAPaHa06g03590.1
exon
part_ofPaHa06g03590.1-exon-6-1787993825:5215258..5215332mRNAPaHa06g03590.1
exon
part_ofPaHa06g03590.1-exon-6-1787993825:5218275..5218345mRNAPaHa06g03590.1
exon
part_ofPaHa06g03590.1-exon-6-1787993825:5222258..5223532mRNAPaHa06g03590.1
exon
part_ofPaHa06g03590.1-exon-6-1787993825:5224189..5224306mRNAPaHa06g03590.1
exon
part_ofPaHa06g03590.1-exon-6-1787993825:5225898..5225997mRNAPaHa06g03590.1
exon
part_ofPaHa06g03590.1-exon-6-1787993825:5227394..5227461mRNAPaHa06g03590.1
