Feature identity
- Identifier
- PaHa06g02390.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,059 bp
- Genomic location
- 6:3,598,696–3,600,757
- Strand
- −
Hass · mRNA
PaHa06g02390.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,059
- bp
- 6:3,598,696–3,600,757
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa06g02390
- eggNOG
- Preferred name: WOX9 | Seed ortholog: 337451.A0A443PFV9 | COG: S | eggNOG OG: Homeodomain@131567|RH-16, Homeodomain@2759|XV-17!, Homeodomain@33090|AkS-22, Homeodomain@3398|BaY-24
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0008284 positive regulation of cell population proliferation; GO:0009793 embryo development ending in seed dormancy; GO:0010075 regulation of meristem growth; GO:0030010 establishment of cell polarity; GO:0048825 cotyledon development; GO:0090451 cotyledon boundary formation
- KEGG
- KO: K09299, K09357, K09378, K09379, K09380, K23560 | Pathway: 04550, 05202, 05206, 05215 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa06g02390.1-protein
derives_frommRNAPaHa06g02390.1
mRNAPaHa06g02390.1
part_ofgenePaHa06g02390
CDS
part_ofPaHa06g02390.1-CDS-6-1787993825:3598696..3598701mRNAPaHa06g02390.1
CDS
part_ofPaHa06g02390.1-CDS-6-1787993825:3598802..3599034mRNAPaHa06g02390.1
CDS
part_ofPaHa06g02390.1-CDS-6-1787993825:3599568..3600257mRNAPaHa06g02390.1
CDS
part_ofPaHa06g02390.1-CDS-6-1787993825:3600628..3600757mRNAPaHa06g02390.1
exon
part_ofPaHa06g02390.1-exon-6-1787993825:3598696..3598701mRNAPaHa06g02390.1
exon
part_ofPaHa06g02390.1-exon-6-1787993825:3598802..3599034mRNAPaHa06g02390.1
exon
part_ofPaHa06g02390.1-exon-6-1787993825:3599568..3600257mRNAPaHa06g02390.1
exon
part_ofPaHa06g02390.1-exon-6-1787993825:3600628..3600757mRNAPaHa06g02390.1
