Feature identity
- Identifier
- PaHa06g02140.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,053 bp
- Genomic location
- 6:3,278,466–3,285,746
- Strand
- +
Hass · mRNA
PaHa06g02140.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,053
- bp
- 6:3,278,466–3,285,746
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa06g02140
- eggNOG
- Preferred name: LOC103720732 | Seed ortholog: 337451.A0A3S3N7B3 | COG: S | eggNOG OG: Ank_3@131567|HZ-14, Ank_3@2759|Jp-15, Ank_4@131567|GW-15
- Gene Ontology
- GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0006631 fatty acid metabolic process; GO:0007265 Ras protein signal transduction; GO:0008150 biological_process; GO:0008283 cell population proliferation; GO:0009612 response to mechanical stimulus; GO:0010313 phytochrome binding; GO:0035994 response to muscle stretch; GO:0045348 positive regulation of MHC class II biosynthetic process; GO:0045893 positive regulation of DNA-templated transcription; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:0060297 regulation of sarcomere organization; GO:0090175 regulation of establishment of planar polarity
- KEGG
- KO: K08062, K10683, K21433, K21438, K21439, K21486 | Pathway: 03440, 04612, 04820, 05152, 05340 | BRITE: 00001, 03019, 03036, 03400, 04121, 04131
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa06g02140.1-protein
derives_frommRNAPaHa06g02140.1
mRNAPaHa06g02140.1
part_ofgenePaHa06g02140
CDS
part_ofPaHa06g02140.1-CDS-6-1787993825:3278466..3278723mRNAPaHa06g02140.1
CDS
part_ofPaHa06g02140.1-CDS-6-1787993825:3278981..3279106mRNAPaHa06g02140.1
CDS
part_ofPaHa06g02140.1-CDS-6-1787993825:3280427..3280480mRNAPaHa06g02140.1
CDS
part_ofPaHa06g02140.1-CDS-6-1787993825:3280586..3280675mRNAPaHa06g02140.1
CDS
part_ofPaHa06g02140.1-CDS-6-1787993825:3280915..3281058mRNAPaHa06g02140.1
CDS
part_ofPaHa06g02140.1-CDS-6-1787993825:3284355..3284526mRNAPaHa06g02140.1
CDS
part_ofPaHa06g02140.1-CDS-6-1787993825:3285538..3285746mRNAPaHa06g02140.1
exon
part_ofPaHa06g02140.1-exon-6-1787993825:3278466..3278723mRNAPaHa06g02140.1
exon
part_ofPaHa06g02140.1-exon-6-1787993825:3278981..3279106mRNAPaHa06g02140.1
exon
part_ofPaHa06g02140.1-exon-6-1787993825:3280427..3280480mRNAPaHa06g02140.1
exon
part_ofPaHa06g02140.1-exon-6-1787993825:3280586..3280675mRNAPaHa06g02140.1
exon
part_ofPaHa06g02140.1-exon-6-1787993825:3280915..3281058mRNAPaHa06g02140.1
exon
part_ofPaHa06g02140.1-exon-6-1787993825:3284355..3284526mRNAPaHa06g02140.1
exon
part_ofPaHa06g02140.1-exon-6-1787993825:3285538..3285746mRNAPaHa06g02140.1
