Feature identity
- Identifier
- PaHa06g00570.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,872 bp
- Genomic location
- 6:1,520,717–1,527,137
- Strand
- −
Hass · mRNA
PaHa06g00570.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,872
- bp
- 6:1,520,717–1,527,137
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa06g00570
- eggNOG
- Preferred name: CCD7 | Seed ortholog: 337451.A0A443PG96 | COG: COG3670 | eggNOG OG: RPE65@131567|B-2
- Gene Ontology
- GO:0009507 chloroplast; GO:0009536 plastid; GO:0009570 chloroplast stroma; GO:0009635 response to herbicide; GO:0009926 auxin polar transport; GO:0010223 secondary shoot formation; GO:0016121 carotene catabolic process; GO:0016124 xanthophyll catabolic process; GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; GO:0045549 9-cis-epoxycarotenoid dioxygenase activity; GO:1901601 strigolactone biosynthetic process
- KEGG
- EC: ec:1.13.11.68 | KO: K17912 | Pathway: 00906, 01110 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa06g00570.1-protein
derives_frommRNAPaHa06g00570.1
mRNAPaHa06g00570.1
part_ofgenePaHa06g00570
CDS
part_ofPaHa06g00570.1-CDS-6-1787993825:1520717..1520860mRNAPaHa06g00570.1
CDS
part_ofPaHa06g00570.1-CDS-6-1787993825:1521078..1521392mRNAPaHa06g00570.1
CDS
part_ofPaHa06g00570.1-CDS-6-1787993825:1522068..1522153mRNAPaHa06g00570.1
CDS
part_ofPaHa06g00570.1-CDS-6-1787993825:1522377..1522652mRNAPaHa06g00570.1
CDS
part_ofPaHa06g00570.1-CDS-6-1787993825:1522822..1522953mRNAPaHa06g00570.1
CDS
part_ofPaHa06g00570.1-CDS-6-1787993825:1523090..1523218mRNAPaHa06g00570.1
CDS
part_ofPaHa06g00570.1-CDS-6-1787993825:1526348..1527137mRNAPaHa06g00570.1
exon
part_ofPaHa06g00570.1-exon-6-1787993825:1520717..1520860mRNAPaHa06g00570.1
exon
part_ofPaHa06g00570.1-exon-6-1787993825:1521078..1521392mRNAPaHa06g00570.1
exon
part_ofPaHa06g00570.1-exon-6-1787993825:1522068..1522153mRNAPaHa06g00570.1
exon
part_ofPaHa06g00570.1-exon-6-1787993825:1522377..1522652mRNAPaHa06g00570.1
exon
part_ofPaHa06g00570.1-exon-6-1787993825:1522822..1522953mRNAPaHa06g00570.1
exon
part_ofPaHa06g00570.1-exon-6-1787993825:1523090..1523218mRNAPaHa06g00570.1
exon
part_ofPaHa06g00570.1-exon-6-1787993825:1526348..1527137mRNAPaHa06g00570.1
