Feature identity
- Identifier
- Pa07g0494
- Feature type
- gene
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 3,855 bp
- Genomic location
- Pa07:7,048,649–7,052,503
- Strand
- −
West Indian T2T · gene
Pa07g0494
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 3,855
- bp
- Pa07:7,048,649–7,052,503
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: UBP22 | Seed ortholog: 337451.A0A443P0T0 | COG: S | eggNOG OG: UCH@131567|Ea-15, UCH@3398|FBM-35, zf-UBP@2759|mP-21, zf-UBP@3398|BZl-32
- Gene Ontology
- GO:0003682 chromatin binding; GO:0003713 transcription coactivator activity; GO:0004197 cysteine-type endopeptidase activity; GO:0004843 cysteine-type deubiquitinase activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008150 biological_process; GO:0008270 zinc ion binding; GO:0010485 histone H4 acetyltransferase activity; GO:0016251 RNA polymerase II general transcription initiation factor activity; GO:0019899 enzyme binding; GO:0042393 histone binding; GO:0060090 molecular adaptor activity; GO:0061578 K63-linked deubiquitinase activity; GO:0070461 SAGA-type complex; GO:0140492 metal-dependent deubiquitinase activity; GO:0140935 histone H2B conserved C-terminal lysine deubiquitinase activity; GO:0140936 histone H2B deubiquitinase activity; GO:0140950 histone H2A deubiquitinase activity; GO:1990380 K48-linked deubiquitinase activity
- KEGG
- EC: ec:3.4.19.12 | KO: K11366 | Pathway: 03083 | BRITE: 00001, 01000, 01002, 03021, 03036, 04121
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPa07g0494.1
part_ofgenePa07g0494
