Feature identity
- Identifier
- PaHa05g36460.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,878 bp
- Genomic location
- 5:85,679,359–85,686,816
- Strand
- −
Hass · mRNA
PaHa05g36460.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,878
- bp
- 5:85,679,359–85,686,816
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g36460
- eggNOG
- Preferred name: BLH9 | Seed ortholog: 337451.A0A443NSV4 | COG: S | eggNOG OG: Homeobox_KN@131567|A-1*, Homeobox_KN@1437183|Xi-18, Homeobox_KN@2759|C-2!, Homeobox_KN@3398|Lz-15, Homeobox_KN@58023|Dh-11, POX@131567|A-1*, POX@1437183|AO-11, POX@3193|R-6
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005829 cytosol; GO:0007389 pattern specification process; GO:0010051 xylem and phloem pattern formation; GO:0010076 maintenance of floral meristem identity; GO:0010077 maintenance of inflorescence meristem identity; GO:0010089 xylem development; GO:0010154 fruit development; GO:0010223 secondary shoot formation; GO:0010228 vegetative to reproductive phase transition of meristem; GO:0043565 sequence-specific DNA binding; GO:0045892 negative regulation of DNA-templated transcription; GO:0048367 shoot system development; GO:0048457 floral whorl morphogenesis; GO:0080006 internode patterning; GO:1905393 plant organ formation
- KEGG
- EC: ec:2.1.1.354 | KO: K09355, K09359, K15610, K15611, K15613, K16670, K16671, K16672, K19383, K19553, K19554, K22748, K24889, K24890, K24891 | Pathway: 00310, 01100, 04113, 04148, 04350, 04391, 04550, 05202 | BRITE: 00001, 01000, 03000, 03036
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g36460.1-protein
derives_frommRNAPaHa05g36460.1
mRNAPaHa05g36460.1
part_ofgenePaHa05g36460
CDS
part_ofPaHa05g36460.1-CDS-5-1787993825:85679359..85679877mRNAPaHa05g36460.1
CDS
part_ofPaHa05g36460.1-CDS-5-1787993825:85680430..85680490mRNAPaHa05g36460.1
CDS
part_ofPaHa05g36460.1-CDS-5-1787993825:85680643..85681013mRNAPaHa05g36460.1
CDS
part_ofPaHa05g36460.1-CDS-5-1787993825:85685890..85686816mRNAPaHa05g36460.1
exon
part_ofPaHa05g36460.1-exon-5-1787993825:85679359..85679877mRNAPaHa05g36460.1
exon
part_ofPaHa05g36460.1-exon-5-1787993825:85680430..85680490mRNAPaHa05g36460.1
exon
part_ofPaHa05g36460.1-exon-5-1787993825:85680643..85681013mRNAPaHa05g36460.1
exon
part_ofPaHa05g36460.1-exon-5-1787993825:85685890..85686816mRNAPaHa05g36460.1
