West Indian T2T · gene

Pa06g0763

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

684
bp
Pa06:10,109,599–10,110,282
genomic location
Record overview

Feature identity

Identifier
Pa06g0763
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
684 bp
Genomic location
Pa06:10,109,599–10,110,282
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: LOC104598565 | Seed ortholog: 337451.A0A3S4PE78 | COG: COG0671 | eggNOG OG: PAP2@131567|XI-19
Gene Ontology
GO:0005515 protein binding; GO:0005635 nuclear envelope; GO:0005637 nuclear inner membrane; GO:0005654 nucleoplasm; GO:0005789 endoplasmic reticulum membrane; GO:0005886 plasma membrane; GO:0006695 cholesterol biosynthetic process; GO:0006720 isoprenoid metabolic process; GO:0008195 phosphatidate phosphatase activity; GO:0010832 negative regulation of myotube differentiation; GO:0016787 hydrolase activity; GO:0018342 protein prenylation; GO:0031965 nuclear membrane; GO:0033383 geranyl diphosphate metabolic process; GO:0036498 IRE1-mediated unfolded protein response; GO:0042392 sphingosine-1-phosphate phosphatase activity; GO:0042577 lipid phosphatase activity; GO:0042632 cholesterol homeostasis; GO:0045339 farnesyl diphosphate catabolic process; GO:0046839 phospholipid dephosphorylation; GO:0052642 lysophosphatidic acid phosphatase activity; GO:0098554 cytoplasmic side of endoplasmic reticulum membrane; GO:0106405 isoprenoid diphosphate phosphatase activity; GO:0120557 farnesyl diphosphatase activity; GO:1902247 geranylgeranyl diphosphate catabolic process; GO:1902565 positive regulation of neutrophil activation
KEGG
KO: K22904 | BRITE: 00001
Biological context

Connected feature records

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