West Indian T2T · gene

Pa06g0439

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

6,148
bp
Pa06:5,571,030–5,577,177
genomic location
Record overview

Feature identity

Identifier
Pa06g0439
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
6,148 bp
Genomic location
Pa06:5,571,030–5,577,177
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: LOC104585783 | Seed ortholog: 337451.A0A443PFG8 | COG: COG0330 | eggNOG OG: Band_7@131567|Kv-12, Band_7_C@131567|A-1, Band_7_C@3398|Me-18
Gene Ontology
GO:0001772 immunological synapse; GO:0003674 molecular_function; GO:0005515 protein binding; GO:0005739 mitochondrion; GO:0005743 mitochondrial inner membrane; GO:0005758 mitochondrial intermembrane space; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0006874 intracellular calcium ion homeostasis; GO:0007005 mitochondrion organization; GO:0007006 mitochondrial membrane organization; GO:0008150 biological_process; GO:0008204 ergosterol metabolic process; GO:0010876 lipid localization; GO:0015629 actin cytoskeleton; GO:0031966 mitochondrial membrane; GO:0032743 positive regulation of interleukin-2 production; GO:0034982 mitochondrial protein processing; GO:0035710 CD4-positive, alpha-beta T cell activation; GO:0042608 T cell receptor binding; GO:0042776 proton motive force-driven mitochondrial ATP synthesis; GO:0044091 membrane biogenesis; GO:0045121 membrane raft; GO:0050852 T cell receptor signaling pathway; GO:0051020 GTPase binding; GO:0051259 protein complex oligomerization; GO:0071466 cellular response to xenobiotic stimulus; GO:1901612 cardiolipin binding; GO:1990046 stress-induced mitochondrial fusion
KEGG
EC: ec:2.7.11.1 | KO: K26392 | Pathway: 04075 | BRITE: 00001, 02000
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.