West Indian T2T · gene

Pa06g0272

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

8,928
bp
Pa06:3,402,331–3,411,258
genomic location
Record overview

Feature identity

Identifier
Pa06g0272
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
8,928 bp
Genomic location
Pa06:3,402,331–3,411,258
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: LOC109022004 | Seed ortholog: 3750.A0A498IVT4 | COG: S | eggNOG OG: Homeodomain@131567|RH-16, Homeodomain@2759|XV-17!, Homeodomain@33090|AkS-22, Homeodomain@3398|BaY-24, Homeodomain@3749|SJD-39, Ras@131567|kE-27, Ras@1437201|AFcG-85, Ras@2759|Fqt-43!, Ras@33090|OHr-51, Ras@3749|AHnL-93, Ras@58023|wIM-73
Gene Ontology
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0008284 positive regulation of cell population proliferation; GO:0009793 embryo development ending in seed dormancy; GO:0010075 regulation of meristem growth; GO:0030010 establishment of cell polarity; GO:0048825 cotyledon development; GO:0090451 cotyledon boundary formation
KEGG
KO: K07904 | Pathway: 04144 | BRITE: 00001, 04031, 04131, 04147
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.