Feature identity
- Identifier
- PaHa05g32210.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 891 bp
- Genomic location
- 5:79,254,691–79,262,011
- Strand
- +
Hass · mRNA
PaHa05g32210.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 891
- bp
- 5:79,254,691–79,262,011
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g32210
- eggNOG
- Preferred name: LOC104599664 | Seed ortholog: 337451.A0A3S3ME53 | COG: COG1028 | eggNOG OG: adh_short_C2@131567|AWH-19, adh_short_C2@3398|AxtH-49
- Gene Ontology
- GO:0003674 molecular_function; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005777 peroxisome; GO:0005778 peroxisomal membrane; GO:0005782 peroxisomal matrix; GO:0005829 cytosol; GO:0006636 unsaturated fatty acid biosynthetic process; GO:0008150 biological_process; GO:0008670 2,4-dienoyl-CoA reductase (NADPH) activity; GO:0009062 fatty acid catabolic process; GO:0019166 trans-2-enoyl-CoA reductase (NADPH) activity; GO:0030437 ascospore formation; GO:0033540 fatty acid beta-oxidation using acyl-CoA oxidase
- KEGG
- EC: ec:1.3.1.124 | KO: K13237 | Pathway: 04146 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g32210.1-protein
derives_frommRNAPaHa05g32210.1
mRNAPaHa05g32210.1
part_ofgenePaHa05g32210
CDS
part_ofPaHa05g32210.1-CDS-5-1787993825:79254691..79254876mRNAPaHa05g32210.1
CDS
part_ofPaHa05g32210.1-CDS-5-1787993825:79257185..79257344mRNAPaHa05g32210.1
CDS
part_ofPaHa05g32210.1-CDS-5-1787993825:79259701..79259870mRNAPaHa05g32210.1
CDS
part_ofPaHa05g32210.1-CDS-5-1787993825:79259965..79260184mRNAPaHa05g32210.1
CDS
part_ofPaHa05g32210.1-CDS-5-1787993825:79261857..79262011mRNAPaHa05g32210.1
exon
part_ofPaHa05g32210.1-exon-5-1787993825:79254691..79254876mRNAPaHa05g32210.1
exon
part_ofPaHa05g32210.1-exon-5-1787993825:79257185..79257344mRNAPaHa05g32210.1
exon
part_ofPaHa05g32210.1-exon-5-1787993825:79259701..79259870mRNAPaHa05g32210.1
exon
part_ofPaHa05g32210.1-exon-5-1787993825:79259965..79260184mRNAPaHa05g32210.1
exon
part_ofPaHa05g32210.1-exon-5-1787993825:79261857..79262011mRNAPaHa05g32210.1
