Feature identity
- Identifier
- Pa05g1593
- Feature type
- gene
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 2,400 bp
- Genomic location
- Pa05:49,171,503–49,173,902
- Strand
- +
West Indian T2T · gene
Pa05g1593
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,400
- bp
- Pa05:49,171,503–49,173,902
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: LOC107761037 | Seed ortholog: 337451.A0A3S3N0S9 | COG: S | eggNOG OG: CBFD_NFYB_HMF@131567|BS-10, CBFD_NFYB_HMF@2759|GM-15, CBFD_NFYB_HMF@33090|Bcx-31, CBFD_NFYB_HMF@3398|ETQ-40
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005829 cytosol; GO:0009408 response to heat; GO:0009414 response to water deprivation; GO:0045893 positive regulation of DNA-templated transcription
- KEGG
- EC: ec:6.5.1.3 | KO: K08065 | Pathway: 04612, 05152, 05166 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPa05g1593.1
part_ofgenePa05g1593
mRNAPa05g1593.2
part_ofgenePa05g1593
