Feature identity
- Identifier
- PaHa01g17790.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 873 bp
- Genomic location
- 1:29,385,113–29,404,286
- Strand
- −
Hass · mRNA
PaHa01g17790.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 873
- bp
- 1:29,385,113–29,404,286
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g17790
- eggNOG
- Preferred name: HY2 | Seed ortholog: 337451.A0A443NMW8 | COG: COG5692 | eggNOG OG: Fe_bilin_red@131567|J-4
- Gene Ontology
- GO:0009507 chloroplast; GO:0010019 chloroplast-nucleus signaling pathway; GO:0050619 phytochromobilin:ferredoxin oxidoreductase activity
- KEGG
- EC: ec:1.3.7.4 | KO: K08101 | Pathway: 00860, 01110 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g17790.1-protein
derives_frommRNAPaHa01g17790.1
mRNAPaHa01g17790.1
part_ofgenePaHa01g17790
CDS
part_ofPaHa01g17790.1-CDS-1-1787993825:29385113..29385298mRNAPaHa01g17790.1
CDS
part_ofPaHa01g17790.1-CDS-1-1787993825:29385405..29385455mRNAPaHa01g17790.1
CDS
part_ofPaHa01g17790.1-CDS-1-1787993825:29385702..29385806mRNAPaHa01g17790.1
CDS
part_ofPaHa01g17790.1-CDS-1-1787993825:29386376..29386507mRNAPaHa01g17790.1
CDS
part_ofPaHa01g17790.1-CDS-1-1787993825:29386968..29387061mRNAPaHa01g17790.1
CDS
part_ofPaHa01g17790.1-CDS-1-1787993825:29392079..29392173mRNAPaHa01g17790.1
CDS
part_ofPaHa01g17790.1-CDS-1-1787993825:29401830..29401946mRNAPaHa01g17790.1
CDS
part_ofPaHa01g17790.1-CDS-1-1787993825:29404194..29404286mRNAPaHa01g17790.1
exon
part_ofPaHa01g17790.1-exon-1-1787993825:29385113..29385298mRNAPaHa01g17790.1
exon
part_ofPaHa01g17790.1-exon-1-1787993825:29385405..29385455mRNAPaHa01g17790.1
exon
part_ofPaHa01g17790.1-exon-1-1787993825:29385702..29385806mRNAPaHa01g17790.1
exon
part_ofPaHa01g17790.1-exon-1-1787993825:29386376..29386507mRNAPaHa01g17790.1
exon
part_ofPaHa01g17790.1-exon-1-1787993825:29386968..29387061mRNAPaHa01g17790.1
exon
part_ofPaHa01g17790.1-exon-1-1787993825:29392079..29392173mRNAPaHa01g17790.1
exon
part_ofPaHa01g17790.1-exon-1-1787993825:29401830..29401946mRNAPaHa01g17790.1
exon
part_ofPaHa01g17790.1-exon-1-1787993825:29404194..29404286mRNAPaHa01g17790.1
