Feature identity
- Identifier
- Pa05g1396
- Feature type
- gene
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 603 bp
- Genomic location
- Pa05:44,895,646–44,896,248
- Strand
- +
West Indian T2T · gene
Pa05g1396
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 603
- bp
- Pa05:44,895,646–44,896,248
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: LOC104587883 | Seed ortholog: 337451.A0A3S3NNM2 | COG: COG2036 | eggNOG OG: CBFD_NFYB_HMF@131567|BS-10, CBFD_NFYB_HMF@1437183|DBu-36, CBFD_NFYB_HMF@2759|GM-15
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009414 response to water deprivation; GO:0009738 abscisic acid-activated signaling pathway; GO:0045893 positive regulation of DNA-templated transcription
- KEGG
- EC: ec:6.5.1.3 | KO: K08065 | Pathway: 04612, 05152, 05166 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPa05g1396.1
part_ofgenePa05g1396
