Feature identity
- Identifier
- PaHa05g29220.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 606 bp
- Genomic location
- 5:75,226,041–75,227,297
- Strand
- +
Hass · mRNA
PaHa05g29220.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 606
- bp
- 5:75,226,041–75,227,297
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g29220
- eggNOG
- Preferred name: LOC103695529 | Seed ortholog: 337451.A0A3S3MLI5 | COG: S | eggNOG OG: LTP_2@131567|AA-6, LTP_2@3193|Cw-9, LTP_2@3398|ZM-15
- Gene Ontology
- GO:0002237 response to molecule of bacterial origin; GO:0002240 response to molecule of oomycetes origin; GO:0003674 molecular_function; GO:0005319 lipid carrier activity; GO:0005576 extracellular region; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0008150 biological_process; GO:0009624 response to nematode; GO:0009845 seed germination; GO:0010214 seed coat development; GO:0015908 fatty acid transport; GO:0016020 membrane; GO:0050832 defense response to fungus; GO:0140426 pathogen-associated molecular pattern receptor signaling pathway
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g29220.1-protein
derives_frommRNAPaHa05g29220.1
mRNAPaHa05g29220.1
part_ofgenePaHa05g29220
CDS
part_ofPaHa05g29220.1-CDS-5-1787993825:75226041..75226359mRNAPaHa05g29220.1
CDS
part_ofPaHa05g29220.1-CDS-5-1787993825:75226622..75226768mRNAPaHa05g29220.1
CDS
part_ofPaHa05g29220.1-CDS-5-1787993825:75227158..75227297mRNAPaHa05g29220.1
exon
part_ofPaHa05g29220.1-exon-5-1787993825:75226041..75226359mRNAPaHa05g29220.1
exon
part_ofPaHa05g29220.1-exon-5-1787993825:75226622..75226768mRNAPaHa05g29220.1
exon
part_ofPaHa05g29220.1-exon-5-1787993825:75227158..75227297mRNAPaHa05g29220.1
