Feature identity
- Identifier
- PaHa05g29180.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,547 bp
- Genomic location
- 5:75,181,255–75,192,336
- Strand
- −
Hass · mRNA
PaHa05g29180.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,547
- bp
- 5:75,181,255–75,192,336
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g29180
- eggNOG
- Preferred name: TCX2 | Seed ortholog: 337451.A0A3S3NLM5 | COG: S | eggNOG OG: TCR@131221|Lu-19, TCR@131567|A-1*, TCR@1437183|oD-30, TCR@2759|AQ-7!, TCR@3193|OY-20, TCR@58023|hx-27
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009934 regulation of meristem structural organization; GO:0010235 guard mother cell cytokinesis; GO:0010375 stomatal complex patterning; GO:0010440 stomatal lineage progression; GO:0010481 epidermal cell division; GO:0048444 floral organ morphogenesis; GO:0051302 regulation of cell division
- KEGG
- KO: K21776 | Pathway: 04218, 04814 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g29180.1-protein
derives_frommRNAPaHa05g29180.1
mRNAPaHa05g29180.1
part_ofgenePaHa05g29180
CDS
part_ofPaHa05g29180.1-CDS-5-1787993825:75181255..75181588mRNAPaHa05g29180.1
CDS
part_ofPaHa05g29180.1-CDS-5-1787993825:75181775..75181928mRNAPaHa05g29180.1
CDS
part_ofPaHa05g29180.1-CDS-5-1787993825:75187074..75187146mRNAPaHa05g29180.1
CDS
part_ofPaHa05g29180.1-CDS-5-1787993825:75187226..75187321mRNAPaHa05g29180.1
CDS
part_ofPaHa05g29180.1-CDS-5-1787993825:75187396..75187576mRNAPaHa05g29180.1
CDS
part_ofPaHa05g29180.1-CDS-5-1787993825:75187828..75187902mRNAPaHa05g29180.1
CDS
part_ofPaHa05g29180.1-CDS-5-1787993825:75187993..75188480mRNAPaHa05g29180.1
CDS
part_ofPaHa05g29180.1-CDS-5-1787993825:75190152..75191058mRNAPaHa05g29180.1
CDS
part_ofPaHa05g29180.1-CDS-5-1787993825:75191149..75191309mRNAPaHa05g29180.1
CDS
part_ofPaHa05g29180.1-CDS-5-1787993825:75192259..75192336mRNAPaHa05g29180.1
exon
part_ofPaHa05g29180.1-exon-5-1787993825:75181255..75181588mRNAPaHa05g29180.1
exon
part_ofPaHa05g29180.1-exon-5-1787993825:75181775..75181928mRNAPaHa05g29180.1
exon
part_ofPaHa05g29180.1-exon-5-1787993825:75187074..75187146mRNAPaHa05g29180.1
exon
part_ofPaHa05g29180.1-exon-5-1787993825:75187226..75187321mRNAPaHa05g29180.1
exon
part_ofPaHa05g29180.1-exon-5-1787993825:75187396..75187576mRNAPaHa05g29180.1
exon
part_ofPaHa05g29180.1-exon-5-1787993825:75187828..75187902mRNAPaHa05g29180.1
exon
part_ofPaHa05g29180.1-exon-5-1787993825:75187993..75188480mRNAPaHa05g29180.1
exon
part_ofPaHa05g29180.1-exon-5-1787993825:75190152..75191058mRNAPaHa05g29180.1
exon
part_ofPaHa05g29180.1-exon-5-1787993825:75191149..75191309mRNAPaHa05g29180.1
exon
part_ofPaHa05g29180.1-exon-5-1787993825:75192259..75192336mRNAPaHa05g29180.1
