Feature identity
- Identifier
- PaHa05g28620.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 3,993 bp
- Genomic location
- 5:74,424,715–74,451,614
- Strand
- +
Hass · mRNA
PaHa05g28620.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 3,993
- bp
- 5:74,424,715–74,451,614
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g28620
- eggNOG
- Preferred name: ABCC1 | Seed ortholog: 337451.A0A3S3NLP7 | COG: S | eggNOG OG: ABC_membrane_2@131567|A-1, ABC_membrane_2@2759|G-3!, ABC_tran|TL31Y9@131567
- Gene Ontology
- GO:0005515 protein binding; GO:0005777 peroxisome; GO:0005778 peroxisomal membrane; GO:0006635 fatty acid beta-oxidation; GO:0006744 ubiquinone biosynthetic process; GO:0010030 positive regulation of seed germination; GO:0015916 fatty-acyl-CoA transport; GO:0016042 lipid catabolic process; GO:0042626 ATPase-coupled transmembrane transporter activity; GO:0046861 glyoxysomal membrane
- KEGG
- EC: ec:7.6.2.4 | KO: K25819 | Pathway: 02010, 04146 | BRITE: 00001, 01000, 02000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g28620.1-protein
derives_frommRNAPaHa05g28620.1
mRNAPaHa05g28620.1
part_ofgenePaHa05g28620
CDS
part_ofPaHa05g28620.1-CDS-5-1787993825:74424715..74424776mRNAPaHa05g28620.1
CDS
part_ofPaHa05g28620.1-CDS-5-1787993825:74426273..74426525mRNAPaHa05g28620.1
CDS
part_ofPaHa05g28620.1-CDS-5-1787993825:74429929..74430153mRNAPaHa05g28620.1
CDS
part_ofPaHa05g28620.1-CDS-5-1787993825:74432976..74433173mRNAPaHa05g28620.1
CDS
part_ofPaHa05g28620.1-CDS-5-1787993825:74433326..74433780mRNAPaHa05g28620.1
CDS
part_ofPaHa05g28620.1-CDS-5-1787993825:74434957..74435095mRNAPaHa05g28620.1
CDS
part_ofPaHa05g28620.1-CDS-5-1787993825:74435180..74435258mRNAPaHa05g28620.1
CDS
part_ofPaHa05g28620.1-CDS-5-1787993825:74436635..74436873mRNAPaHa05g28620.1
CDS
part_ofPaHa05g28620.1-CDS-5-1787993825:74436994..74437298mRNAPaHa05g28620.1
CDS
part_ofPaHa05g28620.1-CDS-5-1787993825:74437405..74437519mRNAPaHa05g28620.1
CDS
part_ofPaHa05g28620.1-CDS-5-1787993825:74437765..74437920mRNAPaHa05g28620.1
CDS
part_ofPaHa05g28620.1-CDS-5-1787993825:74439806..74439905mRNAPaHa05g28620.1
CDS
part_ofPaHa05g28620.1-CDS-5-1787993825:74439984..74440092mRNAPaHa05g28620.1
CDS
part_ofPaHa05g28620.1-CDS-5-1787993825:74440291..74440381mRNAPaHa05g28620.1
CDS
part_ofPaHa05g28620.1-CDS-5-1787993825:74442448..74442572mRNAPaHa05g28620.1
CDS
part_ofPaHa05g28620.1-CDS-5-1787993825:74442734..74442883mRNAPaHa05g28620.1
CDS
part_ofPaHa05g28620.1-CDS-5-1787993825:74443002..74443074mRNAPaHa05g28620.1
CDS
part_ofPaHa05g28620.1-CDS-5-1787993825:74449094..74449274mRNAPaHa05g28620.1
CDS
part_ofPaHa05g28620.1-CDS-5-1787993825:74449353..74449511mRNAPaHa05g28620.1
CDS
part_ofPaHa05g28620.1-CDS-5-1787993825:74450108..74450269mRNAPaHa05g28620.1
CDS
part_ofPaHa05g28620.1-CDS-5-1787993825:74450359..74450595mRNAPaHa05g28620.1
CDS
part_ofPaHa05g28620.1-CDS-5-1787993825:74450917..74451077mRNAPaHa05g28620.1
CDS
part_ofPaHa05g28620.1-CDS-5-1787993825:74451201..74451253mRNAPaHa05g28620.1
CDS
part_ofPaHa05g28620.1-CDS-5-1787993825:74451353..74451431mRNAPaHa05g28620.1
CDS
part_ofPaHa05g28620.1-CDS-5-1787993825:74451528..74451614mRNAPaHa05g28620.1
exon
part_ofPaHa05g28620.1-exon-5-1787993825:74424715..74424776mRNAPaHa05g28620.1
exon
part_ofPaHa05g28620.1-exon-5-1787993825:74426273..74426525mRNAPaHa05g28620.1
exon
part_ofPaHa05g28620.1-exon-5-1787993825:74429929..74430153mRNAPaHa05g28620.1
exon
part_ofPaHa05g28620.1-exon-5-1787993825:74432976..74433173mRNAPaHa05g28620.1
exon
part_ofPaHa05g28620.1-exon-5-1787993825:74433326..74433780mRNAPaHa05g28620.1
exon
part_ofPaHa05g28620.1-exon-5-1787993825:74434957..74435095mRNAPaHa05g28620.1
exon
part_ofPaHa05g28620.1-exon-5-1787993825:74435180..74435258mRNAPaHa05g28620.1
exon
part_ofPaHa05g28620.1-exon-5-1787993825:74436635..74436873mRNAPaHa05g28620.1
exon
part_ofPaHa05g28620.1-exon-5-1787993825:74436994..74437298mRNAPaHa05g28620.1
exon
part_ofPaHa05g28620.1-exon-5-1787993825:74437405..74437519mRNAPaHa05g28620.1
exon
part_ofPaHa05g28620.1-exon-5-1787993825:74437765..74437920mRNAPaHa05g28620.1
exon
part_ofPaHa05g28620.1-exon-5-1787993825:74439806..74439905mRNAPaHa05g28620.1
exon
part_ofPaHa05g28620.1-exon-5-1787993825:74439984..74440092mRNAPaHa05g28620.1
exon
part_ofPaHa05g28620.1-exon-5-1787993825:74440291..74440381mRNAPaHa05g28620.1
exon
part_ofPaHa05g28620.1-exon-5-1787993825:74442448..74442572mRNAPaHa05g28620.1
exon
part_ofPaHa05g28620.1-exon-5-1787993825:74442734..74442883mRNAPaHa05g28620.1
exon
part_ofPaHa05g28620.1-exon-5-1787993825:74443002..74443074mRNAPaHa05g28620.1
exon
part_ofPaHa05g28620.1-exon-5-1787993825:74449094..74449274mRNAPaHa05g28620.1
exon
part_ofPaHa05g28620.1-exon-5-1787993825:74449353..74449511mRNAPaHa05g28620.1
exon
part_ofPaHa05g28620.1-exon-5-1787993825:74450108..74450269mRNAPaHa05g28620.1
exon
part_ofPaHa05g28620.1-exon-5-1787993825:74450359..74450595mRNAPaHa05g28620.1
exon
part_ofPaHa05g28620.1-exon-5-1787993825:74450917..74451077mRNAPaHa05g28620.1
exon
part_ofPaHa05g28620.1-exon-5-1787993825:74451201..74451253mRNAPaHa05g28620.1
exon
part_ofPaHa05g28620.1-exon-5-1787993825:74451353..74451431mRNAPaHa05g28620.1
exon
part_ofPaHa05g28620.1-exon-5-1787993825:74451528..74451614mRNAPaHa05g28620.1
