Feature identity
- Identifier
- Pa04g0444
- Feature type
- gene
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 14,393 bp
- Genomic location
- Pa04:3,022,563–3,036,955
- Strand
- +
West Indian T2T · gene
Pa04g0444
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 14,393
- bp
- Pa04:3,022,563–3,036,955
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: LOC104609048 | Seed ortholog: 337451.A0A443PL38 | COG: S | eggNOG OG: Homeodomain@131567|XU-17, Homeodomain@2759|ACT-20, Homeodomain@33090|OfY-37, PHD@131567|A-1*, PHD@2759|BtH-21
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009733 response to auxin; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription
- KEGG
- EC: ec:2.1.1.354, ec:3.1.3.16, ec:5.6.2.6 | KO: K02606, K09313, K09331, K09995, K10896, K11492, K11643, K11657, K12599, K14818, K14959, K18998, K22748, K24882, K26244 | Pathway: 00310, 01100, 03018, 03082, 04111, 04113 | BRITE: 00001, 01000, 01009, 03000, 03009, 03019, 03021, 03032, 03036, 03400
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPa04g0444.1
part_ofgenePa04g0444
mRNAPa04g0444.2
part_ofgenePa04g0444
mRNAPa04g0444.3
part_ofgenePa04g0444
