West Indian T2T · gene

Pa03g3346

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

8,201
bp
Pa03:76,225,185–76,233,385
genomic location
Record overview

Feature identity

Identifier
Pa03g3346
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
8,201 bp
Genomic location
Pa03:76,225,185–76,233,385
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: PAZX | Seed ortholog: 337451.A0A443NFM8 | COG: S | eggNOG OG: Serpin@131567|PT-13, Serpin@3398|CmB-27
Gene Ontology
GO:0001822 kidney development; GO:0001869 negative regulation of complement activation, lectin pathway; GO:0002034 maintenance of blood vessel diameter homeostasis by renin-angiotensin; GO:0004869 cysteine-type endopeptidase inhibitor activity; GO:0005515 protein binding; GO:0005576 extracellular region; GO:0005737 cytoplasm; GO:0007614 short-term memory; GO:0008015 blood circulation; GO:0010447 response to acidic pH; GO:0010596 negative regulation of endothelial cell migration; GO:0010629 negative regulation of gene expression; GO:0010757 negative regulation of plasminogen activation; GO:0010976 positive regulation of neuron projection development; GO:0016525 negative regulation of angiogenesis; GO:0030199 collagen fibril organization; GO:0032967 positive regulation of collagen biosynthetic process; GO:0042698 ovulation cycle; GO:0042730 fibrinolysis; GO:0045597 positive regulation of cell differentiation; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:0046330 positive regulation of JNK cascade; GO:0046685 response to arsenic-containing substance; GO:0048046 apoplast; GO:0048514 blood vessel morphogenesis; GO:0048661 positive regulation of smooth muscle cell proliferation; GO:0050769 positive regulation of neurogenesis; GO:0051496 positive regulation of stress fiber assembly; GO:0051918 negative regulation of fibrinolysis; GO:0060041 retina development in camera-type eye; GO:0060770 negative regulation of epithelial cell proliferation involved in prostate gland development; GO:0070374 positive regulation of ERK1 and ERK2 cascade; GO:0071279 cellular response to cobalt ion; GO:0071300 cellular response to retinoic acid; GO:0071333 cellular response to glucose stimulus; GO:0071549 cellular response to dexamethasone stimulus; GO:0071636 positive regulation of transforming growth factor beta production; GO:1901652 response to peptide; GO:2000049 positive regulation of cell-cell adhesion mediated by cadherin
KEGG
KO: K13963 | Pathway: 04310, 04610, 05133 | BRITE: 00001, 01002
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.