Feature identity
- Identifier
- PaHa01g17120.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 810 bp
- Genomic location
- 1:27,969,599–27,970,408
- Strand
- −
Hass · mRNA
PaHa01g17120.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 810
- bp
- 1:27,969,599–27,970,408
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g17120
- eggNOG
- Preferred name: LOC110802850 | Seed ortholog: 337451.A0A3S3MH35 | COG: S | eggNOG OG: Myb_DNA-binding@131567|Se-18, Myb_DNA-binding@33090|AYy-28
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009409 response to cold
- KEGG
- KO: K09422, K11111, K12860, K14491, K16166, K17613, K25749 | Pathway: 03040, 04075, 04712 | BRITE: 00001, 01009, 03000, 03032, 03041, 03400
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g17120.1-protein
derives_frommRNAPaHa01g17120.1
mRNAPaHa01g17120.1
part_ofgenePaHa01g17120
CDS
part_ofPaHa01g17120.1-CDS-1-1787993825:27969599..27970408mRNAPaHa01g17120.1
exon
part_ofPaHa01g17120.1-exon-1-1787993825:27969599..27970408mRNAPaHa01g17120.1
