Feature identity
- Identifier
- PaHa05g22530.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,284 bp
- Genomic location
- 5:64,713,293–64,720,432
- Strand
- +
Hass · mRNA
PaHa05g22530.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,284
- bp
- 5:64,713,293–64,720,432
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g22530
- eggNOG
- Preferred name: NAC008 | Seed ortholog: 337451.A0A443NW00 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|HX-10, NAM@3398|US-13, NAM@35493|Z-5
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0010321 regulation of vegetative phase change; GO:0045893 positive regulation of DNA-templated transcription; GO:1905177 tracheary element differentiation; GO:2000652 regulation of secondary cell wall biogenesis
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g22530.1-protein
derives_frommRNAPaHa05g22530.1
mRNAPaHa05g22530.1
part_ofgenePaHa05g22530
CDS
part_ofPaHa05g22530.1-CDS-5-1787993825:64713293..64713412mRNAPaHa05g22530.1
CDS
part_ofPaHa05g22530.1-CDS-5-1787993825:64713548..64713725mRNAPaHa05g22530.1
CDS
part_ofPaHa05g22530.1-CDS-5-1787993825:64713985..64714520mRNAPaHa05g22530.1
CDS
part_ofPaHa05g22530.1-CDS-5-1787993825:64715694..64715954mRNAPaHa05g22530.1
CDS
part_ofPaHa05g22530.1-CDS-5-1787993825:64717214..64717303mRNAPaHa05g22530.1
CDS
part_ofPaHa05g22530.1-CDS-5-1787993825:64720334..64720432mRNAPaHa05g22530.1
exon
part_ofPaHa05g22530.1-exon-5-1787993825:64713293..64713412mRNAPaHa05g22530.1
exon
part_ofPaHa05g22530.1-exon-5-1787993825:64713548..64713725mRNAPaHa05g22530.1
exon
part_ofPaHa05g22530.1-exon-5-1787993825:64713985..64714520mRNAPaHa05g22530.1
exon
part_ofPaHa05g22530.1-exon-5-1787993825:64715694..64715954mRNAPaHa05g22530.1
exon
part_ofPaHa05g22530.1-exon-5-1787993825:64717214..64717303mRNAPaHa05g22530.1
exon
part_ofPaHa05g22530.1-exon-5-1787993825:64720334..64720432mRNAPaHa05g22530.1
