Feature identity
- Identifier
- PaHa05g22480.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 861 bp
- Genomic location
- 5:64,614,829–64,617,232
- Strand
- +
Hass · mRNA
PaHa05g22480.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 861
- bp
- 5:64,614,829–64,617,232
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g22480
- eggNOG
- Preferred name: LOC107953870 | Seed ortholog: 337451.A0A443NW43 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@3193|KPo-43, Myb_DNA-binding@33090|FSl-38, Myb_DNA-binding@3398|Nti-46, Myb_DNA-binding@35493|JKf-42, Myb_DNA-binding@58023|LYZ-44
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0090506 axillary shoot meristem initiation
- KEGG
- KO: K09422 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g22480.1-protein
derives_frommRNAPaHa05g22480.1
mRNAPaHa05g22480.1
part_ofgenePaHa05g22480
CDS
part_ofPaHa05g22480.1-CDS-5-1787993825:64614829..64614964mRNAPaHa05g22480.1
CDS
part_ofPaHa05g22480.1-CDS-5-1787993825:64616420..64616549mRNAPaHa05g22480.1
CDS
part_ofPaHa05g22480.1-CDS-5-1787993825:64616638..64617232mRNAPaHa05g22480.1
exon
part_ofPaHa05g22480.1-exon-5-1787993825:64614829..64614964mRNAPaHa05g22480.1
exon
part_ofPaHa05g22480.1-exon-5-1787993825:64616420..64616549mRNAPaHa05g22480.1
exon
part_ofPaHa05g22480.1-exon-5-1787993825:64616638..64617232mRNAPaHa05g22480.1
