Feature identity
- Identifier
- PaHa05g22460.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 531 bp
- Genomic location
- 5:64,568,166–64,577,890
- Strand
- +
Hass · mRNA
PaHa05g22460.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 531
- bp
- 5:64,568,166–64,577,890
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g22460
- eggNOG
- Preferred name: LOC104588229 | Seed ortholog: 337451.A0A443NW57 | COG: S | eggNOG OG: MIOX@131567|A-1, MIOX@3398|Du-15
- Gene Ontology
- GO:0003014 renal system process; GO:0005575 cellular_component; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0008106 alcohol dehydrogenase (NADP+) activity; GO:0008199 ferric iron binding; GO:0016234 inclusion body; GO:0016491 oxidoreductase activity; GO:0016651 oxidoreductase activity, acting on NAD(P)H; GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen; GO:0019310 inositol catabolic process; GO:0050113 inositol oxygenase activity; GO:0050661 NADP binding
- KEGG
- EC: ec:1.13.99.1 | KO: K00469 | Pathway: 00053, 00562, 01100, 01250 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g22460.1-protein
derives_frommRNAPaHa05g22460.1
mRNAPaHa05g22460.1
part_ofgenePaHa05g22460
CDS
part_ofPaHa05g22460.1-CDS-5-1787993825:64568166..64568184mRNAPaHa05g22460.1
CDS
part_ofPaHa05g22460.1-CDS-5-1787993825:64568320..64568452mRNAPaHa05g22460.1
CDS
part_ofPaHa05g22460.1-CDS-5-1787993825:64568596..64568677mRNAPaHa05g22460.1
CDS
part_ofPaHa05g22460.1-CDS-5-1787993825:64576047..64576251mRNAPaHa05g22460.1
CDS
part_ofPaHa05g22460.1-CDS-5-1787993825:64577248..64577317mRNAPaHa05g22460.1
CDS
part_ofPaHa05g22460.1-CDS-5-1787993825:64577869..64577890mRNAPaHa05g22460.1
exon
part_ofPaHa05g22460.1-exon-5-1787993825:64568166..64568184mRNAPaHa05g22460.1
exon
part_ofPaHa05g22460.1-exon-5-1787993825:64568320..64568452mRNAPaHa05g22460.1
exon
part_ofPaHa05g22460.1-exon-5-1787993825:64568596..64568677mRNAPaHa05g22460.1
exon
part_ofPaHa05g22460.1-exon-5-1787993825:64576047..64576251mRNAPaHa05g22460.1
exon
part_ofPaHa05g22460.1-exon-5-1787993825:64577248..64577317mRNAPaHa05g22460.1
exon
part_ofPaHa05g22460.1-exon-5-1787993825:64577869..64577890mRNAPaHa05g22460.1
