Feature identity
- Identifier
- Pa03g1306
- Feature type
- gene
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 66,664 bp
- Genomic location
- Pa03:23,927,935–23,994,598
- Strand
- +
West Indian T2T · gene
Pa03g1306
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 66,664
- bp
- Pa03:23,927,935–23,994,598
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: TFB2 | Seed ortholog: 337451.A0A3S3Q018 | COG: S | eggNOG OG: Tfb2@131567|A-1, Tfb2_C@2759|A-1
- Gene Ontology
- GO:0001111 RNA polymerase II promoter clearance; GO:0001113 transcription open complex formation at RNA polymerase II promoter; GO:0001671 ATPase activator activity; GO:0003690 double-stranded DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006281 DNA repair; GO:0006289 nucleotide-excision repair; GO:0006366 transcription by RNA polymerase II; GO:0006367 transcription initiation at RNA polymerase II promoter; GO:0010224 response to UV-B; GO:0016251 RNA polymerase II general transcription initiation factor activity
- KEGG
- KO: K03144 | Pathway: 03022, 03420 | BRITE: 00001, 03021, 03400
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPa03g1306.1
part_ofgenePa03g1306
