Feature identity
- Identifier
- PaHa05g22170.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,764 bp
- Genomic location
- 5:64,196,873–64,207,402
- Strand
- +
Hass · mRNA
PaHa05g22170.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,764
- bp
- 5:64,196,873–64,207,402
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g22170
- eggNOG
- Preferred name: ALA4 | Seed ortholog: 337451.A0A3S4NJL3 | COG: S | eggNOG OG: Cation_ATPase@131567|C-2, Cation_ATPase@2759|Xc-18, Cation_ATPase@3193|Bkp-30, Cation_ATPase@33090|ATe-24, Cation_ATPase@3398|CeY-33, PhoLip_ATPase_C@131567|A-1*, PhoLip_ATPase_C@2759|Ei-11!, PhoLip_ATPase_C@3193|sI-23, PhoLip_ATPase_C@33090|SO-17, PhoLip_ATPase_C@3398|AJX-26, PhoLip_ATPase_N@131567|A-1*, PhoLip_ATPase_N@2759|EJ-11, PhoLip_ATPase_N@3193|xI-24, PhoLip_ATPase_N@33090|Tk-18, PhoLip_ATPase_N@3398|ALd-26
- Gene Ontology
- GO:0005739 mitochondrion; GO:0005783 endoplasmic reticulum; GO:0005886 plasma membrane; GO:0008270 zinc ion binding; GO:0009860 pollen tube growth; GO:0010286 heat acclimation; GO:0012505 endomembrane system; GO:0019216 regulation of lipid metabolic process; GO:0140327 flippase activity; GO:1901703 protein localization involved in auxin polar transport
- KEGG
- EC: ec:7.6.2.1 | KO: K01530 | Pathway: 04148 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g22170.1-protein
derives_frommRNAPaHa05g22170.1
mRNAPaHa05g22170.1
part_ofgenePaHa05g22170
CDS
part_ofPaHa05g22170.1-CDS-5-1787993825:64196873..64196951mRNAPaHa05g22170.1
CDS
part_ofPaHa05g22170.1-CDS-5-1787993825:64197247..64197458mRNAPaHa05g22170.1
CDS
part_ofPaHa05g22170.1-CDS-5-1787993825:64197572..64197678mRNAPaHa05g22170.1
CDS
part_ofPaHa05g22170.1-CDS-5-1787993825:64198451..64198553mRNAPaHa05g22170.1
CDS
part_ofPaHa05g22170.1-CDS-5-1787993825:64198879..64198964mRNAPaHa05g22170.1
CDS
part_ofPaHa05g22170.1-CDS-5-1787993825:64206091..64206715mRNAPaHa05g22170.1
CDS
part_ofPaHa05g22170.1-CDS-5-1787993825:64206851..64207402mRNAPaHa05g22170.1
exon
part_ofPaHa05g22170.1-exon-5-1787993825:64196873..64196951mRNAPaHa05g22170.1
exon
part_ofPaHa05g22170.1-exon-5-1787993825:64197247..64197458mRNAPaHa05g22170.1
exon
part_ofPaHa05g22170.1-exon-5-1787993825:64197572..64197678mRNAPaHa05g22170.1
exon
part_ofPaHa05g22170.1-exon-5-1787993825:64198451..64198553mRNAPaHa05g22170.1
exon
part_ofPaHa05g22170.1-exon-5-1787993825:64198879..64198964mRNAPaHa05g22170.1
exon
part_ofPaHa05g22170.1-exon-5-1787993825:64206091..64206715mRNAPaHa05g22170.1
exon
part_ofPaHa05g22170.1-exon-5-1787993825:64206851..64207402mRNAPaHa05g22170.1
