Feature identity
- Identifier
- PaHa05g21060.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,569 bp
- Genomic location
- 5:62,558,531–62,570,417
- Strand
- +
Hass · mRNA
PaHa05g21060.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,569
- bp
- 5:62,558,531–62,570,417
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g21060
- eggNOG
- Preferred name: TGA10 | Seed ortholog: 337451.A0A3S3MFV4 | COG: S | eggNOG OG: DOG1@131567|A-1*, DOG1@2759|Pn-15
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009733 response to auxin; GO:0009751 response to salicylic acid; GO:0009753 response to jasmonic acid; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription
- KEGG
- KO: K14431 | Pathway: 04075 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g21060.1-protein
derives_frommRNAPaHa05g21060.1
mRNAPaHa05g21060.1
part_ofgenePaHa05g21060
CDS
part_ofPaHa05g21060.1-CDS-5-1787993825:62558531..62558691mRNAPaHa05g21060.1
CDS
part_ofPaHa05g21060.1-CDS-5-1787993825:62564029..62564163mRNAPaHa05g21060.1
CDS
part_ofPaHa05g21060.1-CDS-5-1787993825:62564262..62564359mRNAPaHa05g21060.1
CDS
part_ofPaHa05g21060.1-CDS-5-1787993825:62565013..62565086mRNAPaHa05g21060.1
CDS
part_ofPaHa05g21060.1-CDS-5-1787993825:62565170..62565304mRNAPaHa05g21060.1
CDS
part_ofPaHa05g21060.1-CDS-5-1787993825:62565545..62565616mRNAPaHa05g21060.1
CDS
part_ofPaHa05g21060.1-CDS-5-1787993825:62565713..62565772mRNAPaHa05g21060.1
CDS
part_ofPaHa05g21060.1-CDS-5-1787993825:62565903..62565980mRNAPaHa05g21060.1
CDS
part_ofPaHa05g21060.1-CDS-5-1787993825:62566163..62566244mRNAPaHa05g21060.1
CDS
part_ofPaHa05g21060.1-CDS-5-1787993825:62566334..62566605mRNAPaHa05g21060.1
CDS
part_ofPaHa05g21060.1-CDS-5-1787993825:62567297..62567539mRNAPaHa05g21060.1
CDS
part_ofPaHa05g21060.1-CDS-5-1787993825:62570259..62570417mRNAPaHa05g21060.1
exon
part_ofPaHa05g21060.1-exon-5-1787993825:62558531..62558691mRNAPaHa05g21060.1
exon
part_ofPaHa05g21060.1-exon-5-1787993825:62564029..62564163mRNAPaHa05g21060.1
exon
part_ofPaHa05g21060.1-exon-5-1787993825:62564262..62564359mRNAPaHa05g21060.1
exon
part_ofPaHa05g21060.1-exon-5-1787993825:62565013..62565086mRNAPaHa05g21060.1
exon
part_ofPaHa05g21060.1-exon-5-1787993825:62565170..62565304mRNAPaHa05g21060.1
exon
part_ofPaHa05g21060.1-exon-5-1787993825:62565545..62565616mRNAPaHa05g21060.1
exon
part_ofPaHa05g21060.1-exon-5-1787993825:62565713..62565772mRNAPaHa05g21060.1
exon
part_ofPaHa05g21060.1-exon-5-1787993825:62565903..62565980mRNAPaHa05g21060.1
exon
part_ofPaHa05g21060.1-exon-5-1787993825:62566163..62566244mRNAPaHa05g21060.1
exon
part_ofPaHa05g21060.1-exon-5-1787993825:62566334..62566605mRNAPaHa05g21060.1
exon
part_ofPaHa05g21060.1-exon-5-1787993825:62567297..62567539mRNAPaHa05g21060.1
exon
part_ofPaHa05g21060.1-exon-5-1787993825:62570259..62570417mRNAPaHa05g21060.1
