West Indian T2T · gene

Pa02g4984

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

6,357
bp
Pa02:102,672,636–102,678,992
genomic location
Record overview

Feature identity

Identifier
Pa02g4984
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
6,357 bp
Genomic location
Pa02:102,672,636–102,678,992
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: LOC123164700 | Seed ortholog: 337451.A0A3S3PWW9 | COG: S | eggNOG OG: Lipase3_N@35493|G-3, Lipase3_N@58023|V-5, Lipase_3@131567|Fc-12, Lipase_3@2759|cJ-19!, Lipase_3@35493|AZf-25, Lipase_3@58023|BVJ-29
Gene Ontology
GO:0001516 prostaglandin biosynthetic process; GO:0003674 molecular_function; GO:0004465 lipoprotein lipase activity; GO:0004806 triacylglycerol lipase activity; GO:0005515 protein binding; GO:0005886 plasma membrane; GO:0006629 lipid metabolic process; GO:0006690 icosanoid metabolic process; GO:0006979 response to oxidative stress; GO:0007405 neuroblast proliferation; GO:0007602 phototransduction; GO:0010898 positive regulation of triglyceride catabolic process; GO:0016298 lipase activity; GO:0016787 hydrolase activity; GO:0019369 arachidonate metabolic process; GO:0022008 neurogenesis; GO:0045471 response to ethanol; GO:0046340 diacylglycerol catabolic process; GO:0047372 monoacylglycerol lipase activity; GO:0050727 regulation of inflammatory response; GO:0071926 endocannabinoid signaling pathway; GO:0098921 retrograde trans-synaptic signaling by endocannabinoid; GO:0150077 regulation of neuroinflammatory response; GO:1901696 cannabinoid biosynthetic process
KEGG
EC: ec:3.1.1.116 | KO: K13806, K27677 | Pathway: 04723, 04745, 04925 | BRITE: 00001, 01000
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.