Feature identity
- Identifier
- PaHa05g20410.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 453 bp
- Genomic location
- 5:61,715,413–61,728,531
- Strand
- +
Hass · mRNA
PaHa05g20410.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 453
- bp
- 5:61,715,413–61,728,531
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g20410
- eggNOG
- Preferred name: LOC104592142 | Seed ortholog: 337451.A0A443NWI5 | COG: S | eggNOG OG: 4HBT@131567|EZ-10, 4HBT@2759|RS-14, 4HBT@3398|Cva-24
- Gene Ontology
- GO:0005515 protein binding; GO:0005634 nucleus; GO:0005739 mitochondrion; GO:0005759 mitochondrial matrix; GO:0005829 cytosol; GO:0006633 fatty acid biosynthetic process; GO:0006637 acyl-CoA metabolic process; GO:0042802 identical protein binding; GO:0047617 fatty acyl-CoA hydrolase activity; GO:0051289 protein homotetramerization; GO:0052816 long-chain fatty acyl-CoA hydrolase activity; GO:0120163 negative regulation of cold-induced thermogenesis
- KEGG
- KO: K17362 | BRITE: 00001, 01004
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g20410.1-protein
derives_frommRNAPaHa05g20410.1
mRNAPaHa05g20410.1
part_ofgenePaHa05g20410
CDS
part_ofPaHa05g20410.1-CDS-5-1787993825:61715413..61715574mRNAPaHa05g20410.1
CDS
part_ofPaHa05g20410.1-CDS-5-1787993825:61715946..61716086mRNAPaHa05g20410.1
CDS
part_ofPaHa05g20410.1-CDS-5-1787993825:61728382..61728531mRNAPaHa05g20410.1
exon
part_ofPaHa05g20410.1-exon-5-1787993825:61715413..61715574mRNAPaHa05g20410.1
exon
part_ofPaHa05g20410.1-exon-5-1787993825:61715946..61716086mRNAPaHa05g20410.1
exon
part_ofPaHa05g20410.1-exon-5-1787993825:61728382..61728531mRNAPaHa05g20410.1
