Feature identity
- Identifier
- PaHa05g20220.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,155 bp
- Genomic location
- 5:60,001,545–60,007,150
- Strand
- +
Hass · mRNA
PaHa05g20220.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,155
- bp
- 5:60,001,545–60,007,150
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g20220
- eggNOG
- Preferred name: MDHG | Seed ortholog: 337451.A0A3S3MUZ4 | COG: S | eggNOG OG: Ldh_1_C@131567|C-2, Ldh_1_C@33090|vT-21, Ldh_1_C@3398|BTN-27, Ldh_1_N@131567|BL-9, Ldh_1_N@1437183|Csg-32, Ldh_1_N@33090|xq-23, Ldh_1_N@3398|BaT-29
- Gene Ontology
- GO:0000325 plant-type vacuole; GO:0005737 cytoplasm; GO:0005777 peroxisome; GO:0005886 plasma membrane; GO:0009507 chloroplast; GO:0009941 chloroplast envelope; GO:0016615 malate dehydrogenase activity; GO:0031998 regulation of fatty acid beta-oxidation; GO:0042579 microbody; GO:0048046 apoplast; GO:0080093 regulation of photorespiration
- KEGG
- EC: ec:1.1.1.37 | KO: K00026 | Pathway: 00020, 00270, 00620, 00630, 00710, 01100, 01110, 01200 | Module: M00009, M00011, M00012, M00168, M00171 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g20220.1-protein
derives_frommRNAPaHa05g20220.1
mRNAPaHa05g20220.1
part_ofgenePaHa05g20220
CDS
part_ofPaHa05g20220.1-CDS-5-1787993825:60001545..60001581mRNAPaHa05g20220.1
CDS
part_ofPaHa05g20220.1-CDS-5-1787993825:60001671..60001789mRNAPaHa05g20220.1
CDS
part_ofPaHa05g20220.1-CDS-5-1787993825:60002303..60002518mRNAPaHa05g20220.1
CDS
part_ofPaHa05g20220.1-CDS-5-1787993825:60003160..60003474mRNAPaHa05g20220.1
CDS
part_ofPaHa05g20220.1-CDS-5-1787993825:60003740..60003829mRNAPaHa05g20220.1
CDS
part_ofPaHa05g20220.1-CDS-5-1787993825:60003954..60004037mRNAPaHa05g20220.1
CDS
part_ofPaHa05g20220.1-CDS-5-1787993825:60005379..60005414mRNAPaHa05g20220.1
CDS
part_ofPaHa05g20220.1-CDS-5-1787993825:60005522..60005611mRNAPaHa05g20220.1
CDS
part_ofPaHa05g20220.1-CDS-5-1787993825:60005761..60005855mRNAPaHa05g20220.1
CDS
part_ofPaHa05g20220.1-CDS-5-1787993825:60007078..60007150mRNAPaHa05g20220.1
exon
part_ofPaHa05g20220.1-exon-5-1787993825:60001545..60001581mRNAPaHa05g20220.1
exon
part_ofPaHa05g20220.1-exon-5-1787993825:60001671..60001789mRNAPaHa05g20220.1
exon
part_ofPaHa05g20220.1-exon-5-1787993825:60002303..60002518mRNAPaHa05g20220.1
exon
part_ofPaHa05g20220.1-exon-5-1787993825:60003160..60003474mRNAPaHa05g20220.1
exon
part_ofPaHa05g20220.1-exon-5-1787993825:60003740..60003829mRNAPaHa05g20220.1
exon
part_ofPaHa05g20220.1-exon-5-1787993825:60003954..60004037mRNAPaHa05g20220.1
exon
part_ofPaHa05g20220.1-exon-5-1787993825:60005379..60005414mRNAPaHa05g20220.1
exon
part_ofPaHa05g20220.1-exon-5-1787993825:60005522..60005611mRNAPaHa05g20220.1
exon
part_ofPaHa05g20220.1-exon-5-1787993825:60005761..60005855mRNAPaHa05g20220.1
exon
part_ofPaHa05g20220.1-exon-5-1787993825:60007078..60007150mRNAPaHa05g20220.1
