Feature identity
- Identifier
- Pa02g3135
- Feature type
- gene
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 29,463 bp
- Genomic location
- Pa02:78,233,277–78,262,739
- Strand
- −
West Indian T2T · gene
Pa02g3135
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 29,463
- bp
- Pa02:78,233,277–78,262,739
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: LOC104590570 | Seed ortholog: 337451.A0A443N5U5 | COG: S | eggNOG OG: Tau95@2759|A-1, Tau95_N@2759|A-1
- Gene Ontology
- GO:0000992 RNA polymerase III cis-regulatory region sequence-specific DNA binding; GO:0000995 RNA polymerase III general transcription initiation factor activity; GO:0001002 RNA polymerase III type 1 promoter sequence-specific DNA binding; GO:0001003 RNA polymerase III type 2 promoter sequence-specific DNA binding; GO:0003677 DNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006383 transcription by RNA polymerase III; GO:0006384 transcription initiation at RNA polymerase III promoter; GO:0008150 biological_process; GO:0008301 DNA binding, bending; GO:0035914 skeletal muscle cell differentiation; GO:0042791 5S class rRNA transcription by RNA polymerase III; GO:0042797 tRNA transcription by RNA polymerase III; GO:0043035 chromatin insulator sequence binding
- KEGG
- KO: K15202 | BRITE: 00001, 03021
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPa02g3135.1
part_ofgenePa02g3135
mRNAPa02g3135.2
part_ofgenePa02g3135
